Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC189A1A4V9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC189A1A4V9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC189A1A4V9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC189A1A4V9 RNU1-91P-201ENST00000364746 163 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 SNORA54-201ENST00000384281 123 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 RNU2-66P-201ENST00000410650 161 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC189A1A4V9 AL606489.2-201ENST00000433886 234 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 AC013470.1-201ENST00000453438 462 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 AC083798.1-201ENST00000472671 131 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 AC117440.1-201ENST00000474107 571 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 AC068781.1-201ENST00000488231 618 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 AC107401.1-201ENST00000503426 685 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 MTND2P33-201ENST00000506452 1031 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC189A1A4V9 AC097065.2-201ENST00000608159 533 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC189A1A4V9 AL354685.2-201ENST00000448218 1447 ntBASIC2.91□□□□□ -1.94
CCDC189A1A4V9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC189A1A4V9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC189A1A4V9 RNA5SP171-201ENST00000391071 115 ntBASIC2.9□□□□□ -1.95
CCDC189A1A4V9 AC068050.1-201ENST00000394891 380 ntBASIC2.9□□□□□ -1.95
CCDC189A1A4V9 AIMP1P2-201ENST00000425294 312 ntBASIC2.9□□□□□ -1.95
CCDC189A1A4V9 YME1L1P1-201ENST00000429435 297 ntBASIC2.9□□□□□ -1.95
CCDC189A1A4V9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC189A1A4V9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC189A1A4V9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC189A1A4V9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC189A1A4V9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC189A1A4V9 RPL30P12-201ENST00000474666 353 ntBASIC2.9□□□□□ -1.95
CCDC189A1A4V9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC189A1A4V9 RNA5SP402-201ENST00000517148 110 ntBASIC2.9□□□□□ -1.95
CCDC189A1A4V9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC189A1A4V9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC189A1A4V9 AL356157.2-201ENST00000605122 111 ntBASIC2.9□□□□□ -1.95
CCDC189A1A4V9 AC002044.1-201ENST00000606707 158 ntBASIC2.9□□□□□ -1.95
CCDC189A1A4V9 AL161423.1-201ENST00000613700 262 ntBASIC2.9□□□□□ -1.95
CCDC189A1A4V9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC189A1A4V9 RNU1-35P-201ENST00000362782 153 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 SNORD46.1-201ENST00000364139 104 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 SNORA25B-201ENST00000365507 128 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 Y_RNA.559-201ENST00000384686 107 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 RNU6-1106P-201ENST00000390845 107 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC189A1A4V9 RNA5SP270-201ENST00000411361 118 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 USP9YP18-201ENST00000425912 695 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC189A1A4V9 IFNA11P-201ENST00000446352 526 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 CACYBPP2-201ENST00000453625 678 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 SRRM1P2-201ENST00000464531 1192 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC189A1A4V9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC189A1A4V9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC189A1A4V9 AC104383.1-201ENST00000530297 370 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC189A1A4V9 AC078899.2-201ENST00000595282 212 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 APOOP1-201ENST00000604695 592 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 AL158209.2-201ENST00000619266 216 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 AC012314.7-201ENST00000619693 93 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 AC090517.3-201ENST00000625170 141 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 OR5AK4P-201ENST00000635912 903 ntBASIC2.89□□□□□ -1.95
CCDC189A1A4V9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC189A1A4V9 Y_RNA.40-201ENST00000362645 93 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 RNU6-1085P-201ENST00000363576 107 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 RNU6-82P-201ENST00000363970 107 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 SNORA71.1-201ENST00000364523 117 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 MIR544A-201ENST00000384855 91 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 MIR34B-201ENST00000385076 84 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 SNORD37.1-201ENST00000390968 65 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC189A1A4V9 AL590556.1-201ENST00000423231 483 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 AC112220.1-201ENST00000434628 355 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC189A1A4V9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC189A1A4V9 AC091885.1-201ENST00000506658 268 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 HMGB3P3-201ENST00000510526 400 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 RNA5SP137-201ENST00000516833 135 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC189A1A4V9 AC121758.2-201ENST00000553271 193 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC189A1A4V9 MIR4424-201ENST00000585257 86 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 MIR6863-201ENST00000636112 90 ntBASIC2.88□□□□□ -1.95
CCDC189A1A4V9 AP000560.1-201ENST00000624150 1937 ntBASIC2.87□□□□□ -1.95
CCDC189A1A4V9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CCDC189A1A4V9 Y_RNA.194-201ENST00000363985 102 ntBASIC2.87□□□□□ -1.95
CCDC189A1A4V9 SNORA3A-201ENST00000364113 130 ntBASIC2.87□□□□□ -1.95
CCDC189A1A4V9 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.87□□□□□ -1.95
CCDC189A1A4V9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC189A1A4V9 MIR23A-201ENST00000385245 73 ntBASIC2.87□□□□□ -1.95
CCDC189A1A4V9 MTCO3P40-201ENST00000392516 676 ntBASIC2.87□□□□□ -1.95
CCDC189A1A4V9 RPS29P13-201ENST00000402041 169 ntBASIC2.87□□□□□ -1.95
CCDC189A1A4V9 AF274854.1-201ENST00000413236 615 ntBASIC2.87□□□□□ -1.95
CCDC189A1A4V9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC189A1A4V9 RPLP0P7-201ENST00000416050 667 ntBASIC2.87□□□□□ -1.95
CCDC189A1A4V9 ARL5AP1-201ENST00000418991 388 ntBASIC2.87□□□□□ -1.95
CCDC189A1A4V9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC189A1A4V9 DNAJC19P4-201ENST00000440115 345 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms