Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 Y_RNA.446-201ENST00000384178 104 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 Y_RNA.595-201ENST00000410403 105 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AC112220.1-201ENST00000434628 355 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 POLR2KP2-201ENST00000438155 177 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 TMSB4XP3-201ENST00000445144 114 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AL645939.1-201ENST00000453429 797 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 RPL23AP81-201ENST00000455252 467 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 SNORD2.1-201ENST00000458762 69 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 Y_RNA.662-201ENST00000516028 97 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 IGKV2-38-201ENST00000517443 247 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AC136624.4-201ENST00000573044 370 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 FAM25E-202ENST00000608562 189 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AL359198.2-201ENST00000611836 194 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AC010999.1-201ENST00000611856 324 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AC006001.4-201ENST00000622243 395 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AC091953.3-201ENST00000623220 236 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 U6.106-201ENST00000636360 105 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 SDAD1P1-202ENST00000524156 2051 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AC126755.2-208ENST00000327792 462 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AC138969.1-213ENST00000331436 462 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 Y_RNA.331-201ENST00000365267 102 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 RNU6-47P-201ENST00000383866 107 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 RNY1P5-201ENST00000383890 115 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 MTCO2P33-201ENST00000402100 465 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 MIR548I2-201ENST00000408348 149 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 ADAM3A-203ENST00000461344 2157 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AP001025.1-201ENST00000486139 332 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AC020593.1-201ENST00000507399 299 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AC074133.1-201ENST00000515696 183 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 RNU6-1278P-201ENST00000516130 107 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AC233702.2-202ENST00000562547 291 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 MZT1P2-201ENST00000604387 248 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AL591034.3-201ENST00000605511 685 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 MIR6820-201ENST00000611508 62 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AC073349.3-201ENST00000617616 186 ntBASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHISA3A0PJX4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHISA3A0PJX4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 RNU6-873P-201ENST00000363833 107 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 SNORD113-1-201ENST00000365321 69 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 Y_RNA.383-201ENST00000383855 97 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 Y_RNA.418-201ENST00000384029 102 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 RNU6-213P-201ENST00000384051 104 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 SNORA36A-201ENST00000384221 132 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 RNU6-1289P-201ENST00000384431 106 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 RNU6-493P-201ENST00000391321 108 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 BPY2DP-201ENST00000422208 265 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 AC012306.1-201ENST00000423267 114 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 RPL39P29-201ENST00000447779 157 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 NUTF2P3-201ENST00000448540 384 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 AC005042.3-201ENST00000453230 174 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 AC115990.1-201ENST00000526957 301 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 AC006064.5-201ENST00000541782 248 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 AC021739.1-201ENST00000559631 174 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 AC090897.2-201ENST00000581715 130 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 KLKP1-201ENST00000595979 403 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 AL356575.1-201ENST00000603008 283 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 AC022441.3-201ENST00000605737 136 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 AL110115.1-201ENST00000614396 364 ntBASIC3.73□□□□□ -1.81
SHISA3A0PJX4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.73□□□□□ -1.81
SHISA3A0PJX4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SHISA3A0PJX4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.73□□□□□ -1.81
SHISA3A0PJX4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHISA3A0PJX4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms