Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 AC100770.1-201ENST00000532310 322 ntBASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 AC092447.9-201ENST00000603395 144 ntBASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 AP001836.1-201ENST00000604675 523 ntBASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC163A0A0D9SF12 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 Y_RNA.148-201ENST00000363557 117 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 RNA5SP139-201ENST00000364340 117 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 Y_RNA.252-201ENST00000364556 101 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 RNY1P14-201ENST00000384426 108 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 RNU6-1156P-201ENST00000410365 100 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 EIF4EP2-201ENST00000422816 654 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 AC092423.1-201ENST00000430165 186 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 RN7SL807P-201ENST00000470923 297 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 HMGN1P10-201ENST00000474557 553 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 RPL30P12-201ENST00000474666 353 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 AC006517.1-201ENST00000480485 328 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 AC026784.1-201ENST00000507986 352 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 SNORA25.10-201ENST00000515926 124 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 SNORA31.21-201ENST00000517180 77 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 AC009812.2-201ENST00000517657 457 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 AC010653.1-201ENST00000571108 881 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 AC092628.2-201ENST00000622492 339 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 MIR3651-201ENST00000630427 90 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 MIR3529-201ENST00000637713 78 ntBASIC3.8□□□□□ -1.8
CCDC163A0A0D9SF12 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 ZNF299P-201ENST00000406845 1804 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 SNORD50.1-201ENST00000362987 71 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 Y_RNA.496-201ENST00000384444 101 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 EI24P2-201ENST00000397776 1076 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 AP000275.1-201ENST00000411943 390 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 PTGES3P4-201ENST00000426243 356 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 SNORA59A-201ENST00000459326 152 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 RNU7-169P-201ENST00000459456 61 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 RPS29P2-201ENST00000479278 136 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 RNU6-1045P-201ENST00000516321 107 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 RN7SKP272-201ENST00000516988 232 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 IGLV3-26-201ENST00000520756 302 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 AC008737.2-201ENST00000599446 118 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 VN1R107P-201ENST00000601784 209 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 AL355877.2-201ENST00000603670 358 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 MIR1244-1-201ENST00000612829 85 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 MIR1244-3-201ENST00000635744 85 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 MIR1244-2-201ENST00000636449 85 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 MIR1244-4-202ENST00000636813 85 ntBASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC163A0A0D9SF12 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 MAPK10-362ENST00000641864 4484 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 RNA5SP50-201ENST00000363731 107 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 RNY3P11-201ENST00000364153 102 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 RNU6-1160P-201ENST00000384546 104 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 RNU6-700P-201ENST00000391043 107 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AC096644.2-201ENST00000429278 159 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AC099799.1-201ENST00000439809 192 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AL031659.1-201ENST00000447075 539 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 SNORA31.23-201ENST00000517219 133 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AC023442.1-201ENST00000531247 422 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AC069240.1-201ENST00000548774 375 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 SUB1P3-201ENST00000564581 315 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 MIR3186-201ENST00000577404 85 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 7SK.7-201ENST00000603504 247 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 MIR7851-201ENST00000610611 160 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms