Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 ZNF299P-201ENST00000406845 1804 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 RBBP8P1-201ENST00000449447 1844 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC032011.1-201ENST00000611703 1549 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNU6-99P-201ENST00000364721 107 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNU6-843P-201ENST00000384454 104 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNU6-19P-201ENST00000384718 107 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR606-201ENST00000384851 96 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNA5SP171-201ENST00000391071 115 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC008267.5-201ENST00000424928 265 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 HMGN2P31-201ENST00000432430 273 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC007969.2-201ENST00000441891 191 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNORD105B-201ENST00000458770 79 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC105758.1-201ENST00000506038 399 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 RN7SKP209-201ENST00000516888 304 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNORD19.2-201ENST00000516978 73 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC005034.5-201ENST00000604219 466 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 U3.45-201ENST00000607547 219 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC009318.2-201ENST00000610917 651 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 PART1_1.1-201ENST00000611761 217 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR6075-201ENST00000620782 95 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 MTND4P1-201ENST00000457501 1466 ntBASIC2.63□□□□□ -1.99
IGHV4-28A0A0C4DH34 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MAPK10-372ENST00000641954 3413 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNORD9-201ENST00000362566 104 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNORA71.3-201ENST00000362582 128 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 Y_RNA.428-201ENST00000384078 102 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNU6-784P-201ENST00000384330 106 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNY1P14-201ENST00000384426 108 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR544A-201ENST00000384855 91 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR218-2-201ENST00000385006 110 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR591-201ENST00000385290 95 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNU6-750P-201ENST00000390946 107 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL133475.1-201ENST00000404414 305 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MCFD2P1-201ENST00000417812 300 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL365496.1-201ENST00000426885 215 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL160004.2-201ENST00000432935 350 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MTND4P19-201ENST00000446659 478 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL031659.1-201ENST00000447075 539 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL358232.1-201ENST00000448030 501 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 GSTA11P-201ENST00000452866 669 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC079354.2-201ENST00000453523 154 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC107626.1-201ENST00000471084 183 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AP001025.1-201ENST00000486139 332 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC091874.1-201ENST00000511402 339 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNORD116.3-201ENST00000517176 78 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 SUB1P3-201ENST00000564581 315 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC025281.1-201ENST00000567026 265 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR5696-201ENST00000578474 85 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR4444-1-201ENST00000581696 74 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR4444-2-201ENST00000584390 74 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC006504.6-201ENST00000590142 199 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC006157.1-201ENST00000611750 366 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC083806.3-201ENST00000614016 455 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 XIST_intron.1-201ENST00000619444 68 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC007496.3-201ENST00000624987 3443 ntBASIC2.62□□□□□ -1.99
IGHV4-28A0A0C4DH34 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
IGHV4-28A0A0C4DH34 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
IGHV4-28A0A0C4DH34 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
IGHV4-28A0A0C4DH34 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.61□□□□□ -1.99
IGHV4-28A0A0C4DH34 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
IGHV4-28A0A0C4DH34 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNU6-595P-201ENST00000363944 107 ntBASIC2.61□□□□□ -1.99
IGHV4-28A0A0C4DH34 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR767-201ENST00000390228 109 ntBASIC2.61□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNU6-1140P-201ENST00000410517 106 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms