Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 MTND4P16-201ENST00000466108 1367 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-1164P-201ENST00000364428 107 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-946P-201ENST00000383878 107 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-203P-201ENST00000384038 104 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-622P-201ENST00000384272 103 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-611P-201ENST00000384276 104 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-843P-201ENST00000384454 104 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RNA5SP501-201ENST00000410990 112 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RNU2-32P-201ENST00000411193 191 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AC138623.1-201ENST00000418060 216 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AL022400.1-201ENST00000423946 935 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AL357134.1-201ENST00000445848 426 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 EXOSC3P1-201ENST00000448649 500 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 HSPE1P24-201ENST00000450782 238 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 USP9YP25-201ENST00000457708 443 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AC093899.1-201ENST00000457984 376 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RPS29P23-201ENST00000458635 123 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 SNORD97-201ENST00000459187 142 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 snoU109.2-201ENST00000459316 135 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AL121594.1-201ENST00000475906 575 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-677P-201ENST00000516914 101 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-1092P-201ENST00000516955 87 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AL354943.1-201ENST00000572103 781 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 MIR4307-201ENST00000582802 84 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 VN1R80P-201ENST00000597126 338 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AL391001.1-201ENST00000602747 715 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 CYP2C61P-201ENST00000604072 290 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AL355816.2-201ENST00000610049 647 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AC004908.3-201ENST00000610248 625 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AC091304.6-201ENST00000619761 202 ntBASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRAV41A0A0B4J266 AC092104.1-201ENST00000497346 1441 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 RNU1-62P-201ENST00000362599 164 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 RNU4-92P-201ENST00000363783 136 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-190P-201ENST00000384154 102 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 SNORD14D-201ENST00000384390 87 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 RPS20P2-201ENST00000402520 389 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 UBE2V1P10-201ENST00000414685 269 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AC074117.2-201ENST00000417130 397 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AL365338.1-201ENST00000422282 858 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 HMGB1P18-201ENST00000438801 619 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 CALM1P1-201ENST00000442082 433 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 PTENP1-201ENST00000447117 1215 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 RNU7-95P-201ENST00000459222 64 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AC107934.1-201ENST00000522215 217 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AP005660.1-201ENST00000522972 293 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AC087441.2-201ENST00000529141 262 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 MIR4421-201ENST00000578133 69 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 PRR13P7-201ENST00000605538 430 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 uc_338.15-201ENST00000615470 191 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AC090517.3-201ENST00000625170 141 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 MTND5P10-201ENST00000603719 1809 ntBASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV41A0A0B4J266 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 SNORA7.1-201ENST00000363750 139 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 RNY4P16-201ENST00000364768 94 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-395P-201ENST00000365662 106 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 RNU6-72P-201ENST00000384285 79 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 Y_RNA.623-201ENST00000411128 95 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 BTF3P4-201ENST00000418852 495 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 MTCO3P46-201ENST00000425787 232 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 VN1R108P-201ENST00000431580 830 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 MTCO3P5-201ENST00000433620 714 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 HMGB1P31-201ENST00000437242 427 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AL354941.1-201ENST00000438600 464 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AL008629.1-201ENST00000438615 184 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AC118469.1-201ENST00000442943 488 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 AC003071.1-201ENST00000451219 789 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 MTATP6P14-201ENST00000455189 673 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 FO393415.2-201ENST00000480085 343 ntBASIC1.06□□□□□ -2.24
TRAV41A0A0B4J266 Y_RNA.689-201ENST00000516589 107 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms