Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 MTND3P13-201ENST00000574391 343 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR4498-201ENST00000577599 66 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 SNORA77B-201ENST00000578179 125 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR1273C-201ENST00000578669 77 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AC073413.2-201ENST00000604332 360 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AL645939.4-201ENST00000604495 135 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AL365204.3-201ENST00000612448 685 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AC091948.2-201ENST00000636510 279 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 MTND5P42-201ENST00000637720 498 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AC092125.1-201ENST00000562568 1995 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 Y_RNA.40-201ENST00000362645 93 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-655P-201ENST00000362858 107 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 Y_RNA.67-201ENST00000362870 100 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 SNORA7.1-201ENST00000363750 139 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-439P-201ENST00000384188 106 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR618-201ENST00000385287 98 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC016831.2-201ENST00000417179 352 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC138623.1-201ENST00000418060 216 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 TOMM22P2-201ENST00000430735 237 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 MTND4P25-201ENST00000441039 533 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-953P-201ENST00000459154 107 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC010409.1-201ENST00000487382 476 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC021146.8-201ENST00000507455 733 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 MTCYBP40-201ENST00000509390 1135 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-1315P-201ENST00000517187 99 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-902P-201ENST00000517212 91 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC005668.1-201ENST00000571142 476 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC092574.1-201ENST00000609771 420 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC004908.3-201ENST00000610248 625 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR6078-201ENST00000611069 100 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AL512427.1-201ENST00000618593 349 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC123767.1-202ENST00000620407 817 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AL512643.1-201ENST00000635735 524 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 AC099654.8-201ENST00000637757 681 ntBASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-1210P-201ENST00000363775 107 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-271P-201ENST00000363858 105 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU5A-8P-201ENST00000364102 114 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-278P-201ENST00000390945 109 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR320C1-201ENST00000408566 88 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU4-62P-201ENST00000410125 130 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU2-23P-201ENST00000410545 195 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AL603825.1-201ENST00000438481 80 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AL606517.1-201ENST00000446914 387 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AC079395.1-201ENST00000510981 262 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AC092325.1-201ENST00000566449 554 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AC025678.1-201ENST00000567861 338 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR3169-201ENST00000578032 83 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR4303-201ENST00000581299 66 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 BNIP3P30-201ENST00000601184 574 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AC012065.4-201ENST00000602445 679 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 AC097468.3-201ENST00000607956 456 ntBASIC0.86□□□□□ -2.27
TRAV1-1A0A0B4J248 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR302D-201ENST00000362275 68 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 SNORA75B-201ENST00000384053 137 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-1025P-201ENST00000410629 104 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 AC004965.1-201ENST00000413033 213 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 UBE2V1P10-201ENST00000414685 269 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 AP1B1P2-201ENST00000416196 106 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 snoU13.9-201ENST00000458927 103 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 RPL30P6-201ENST00000475925 342 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 AC093259.1-201ENST00000509755 300 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 AC025465.3-201ENST00000510570 311 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 AC108078.2-201ENST00000510750 236 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 TRMT112P2-201ENST00000512910 132 ntBASIC0.85□□□□□ -2.27
TRAV1-1A0A0B4J248 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms