Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 Y_RNA.188-201ENST00000363952 111 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.324-201ENST00000365165 102 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 RNU6-128P-201ENST00000383976 107 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 RNU6-26P-201ENST00000383985 107 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 RNU6-310P-201ENST00000384655 107 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 MIR888-201ENST00000401186 77 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 AL592148.1-201ENST00000413568 445 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 ATG3P1-201ENST00000419507 911 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 AC007560.1-201ENST00000426912 237 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 AL078601.1-201ENST00000444542 271 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.653-201ENST00000459091 95 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 RNU7-138P-201ENST00000459479 64 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 RPL27AP5-201ENST00000469428 449 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 RN7SKP24-201ENST00000515888 284 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 RNU6-572P-201ENST00000516724 80 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 RNU6-273P-201ENST00000516937 96 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 RNU6-703P-201ENST00000516946 107 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 AC008269.2-201ENST00000561915 1105 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 MIR4298-201ENST00000584380 73 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 AC023043.2-201ENST00000589678 1026 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 AC005014.2-201ENST00000607795 599 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 AL162274.2-201ENST00000614406 332 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 MTND5P30-201ENST00000452896 1731 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 SNORD14B-201ENST00000364533 90 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 RNU6-384P-201ENST00000364900 104 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 SNORA63.7-201ENST00000365579 123 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 SET-203ENST00000372688 801 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 RNU6-1040P-201ENST00000383974 107 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 RNU6-166P-201ENST00000384371 107 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.482-201ENST00000384377 111 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 EI24P2-201ENST00000397776 1076 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AL603908.1-201ENST00000406098 201 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 RPL26P27-201ENST00000414397 437 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 HMGN2P30-201ENST00000423237 256 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AL359672.1-201ENST00000442302 409 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AC092798.1-201ENST00000458542 409 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 RNU6-928P-201ENST00000516876 104 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AP000867.2-201ENST00000532468 320 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AL161670.1-201ENST00000554348 137 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 MIR4790-201ENST00000577799 79 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 MIR4513-201ENST00000581077 86 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AC083806.3-201ENST00000614016 455 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AL138726.1-201ENST00000614873 333 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AC007485.1-201ENST00000616755 206 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 U2.21-201ENST00000637295 81 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 AL356274.2-201ENST00000624379 3752 ntBASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC187A0A096LP49 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 AC233263.6-201ENST00000631132 1963 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.153-201ENST00000363615 91 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 RNU6-270P-201ENST00000364131 105 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.252-201ENST00000364556 101 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 SNORA14A-201ENST00000364773 135 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 RNU1-101P-201ENST00000391171 127 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 AL360182.1-201ENST00000397433 468 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 RNU4-47P-201ENST00000410876 114 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.646-201ENST00000410980 101 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 RNU6-847P-201ENST00000411115 108 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 AL139396.1-201ENST00000421137 167 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 RPL23AP82-202ENST00000427528 469 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 AL158071.1-201ENST00000430315 461 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 Z75741.1-201ENST00000446793 314 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 MTATP6P7-201ENST00000453315 681 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 MIR2053-201ENST00000459295 91 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 U8.20-201ENST00000459445 131 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 RN7SKP83-201ENST00000516512 178 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 RNU6-1332P-201ENST00000516666 104 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 RNU6-1271P-201ENST00000517049 105 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 AL137843.1-201ENST00000605078 385 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 AL157817.1-201ENST00000614264 790 ntBASIC3.24□□□□□ -1.89
CCDC187A0A096LP49 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms