Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp2Q9R061 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp2Q9R061 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp2Q9R061 Gm10566-201ENSMUST00000086739 996 ntBASIC14.36□□□□□ -0.11
Nubp2Q9R061 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.36□□□□□ -0.11
Nubp2Q9R061 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nubp2Q9R061 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nubp2Q9R061 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp2Q9R061 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp2Q9R061 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp2Q9R061 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.36□□□□□ -0.11
Nubp2Q9R061 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp2Q9R061 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.34□□□□□ -0.11
Nubp2Q9R061 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.34□□□□□ -0.11
Nubp2Q9R061 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.34□□□□□ -0.11
Nubp2Q9R061 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp2Q9R061 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.33□□□□□ -0.11
Nubp2Q9R061 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nubp2Q9R061 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nubp2Q9R061 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nubp2Q9R061 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nubp2Q9R061 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nubp2Q9R061 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Nubp2Q9R061 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nubp2Q9R061 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp2Q9R061 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms