Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Gm10252-201ENSMUST00000209541 832 ntBASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.13■□□□□ 0.49
Chaf1aQ9QWF0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1aQ9QWF0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Gm13186-201ENSMUST00000118031 316 ntBASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1aQ9QWF0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1aQ9QWF0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Actl10-202ENSMUST00000226583 1501 ntBASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1aQ9QWF0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chaf1aQ9QWF0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chaf1aQ9QWF0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chaf1aQ9QWF0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chaf1aQ9QWF0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms