Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk1aQ9D132 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Upk1aQ9D132 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Upk1aQ9D132 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk1aQ9D132 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Upk1aQ9D132 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Upk1aQ9D132 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Upk1aQ9D132 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Upk1aQ9D132 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.33■□□□□ 0.04
Upk1aQ9D132 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.33■□□□□ 0.04
Upk1aQ9D132 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk1aQ9D132 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Gm715-201ENSMUST00000117865 831 ntBASIC15.32■□□□□ 0.04
Upk1aQ9D132 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Gm3375-201ENSMUST00000203929 796 ntBASIC15.32■□□□□ 0.04
Upk1aQ9D132 Gm18115-201ENSMUST00000221209 621 ntBASIC15.32■□□□□ 0.04
Upk1aQ9D132 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Odf3b-204ENSMUST00000227834 930 ntBASIC15.32■□□□□ 0.04
Upk1aQ9D132 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk1aQ9D132 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.31■□□□□ 0.04
Upk1aQ9D132 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.31■□□□□ 0.04
Upk1aQ9D132 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Gm8520-201ENSMUST00000186517 868 ntBASIC15.31■□□□□ 0.04
Upk1aQ9D132 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk1aQ9D132 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.3■□□□□ 0.04
Upk1aQ9D132 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms