Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HHIPQ96QV1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HHIPQ96QV1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HHIPQ96QV1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HHIPQ96QV1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HHIPQ96QV1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.23■□□□□ 0.67
HHIPQ96QV1 ATP5G2P1-201ENST00000433580 426 ntBASIC19.23■□□□□ 0.67
HHIPQ96QV1 SPDYE13P-201ENST00000445314 798 ntBASIC19.23■□□□□ 0.67
HHIPQ96QV1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HHIPQ96QV1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.23■□□□□ 0.67
HHIPQ96QV1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HHIPQ96QV1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HHIPQ96QV1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
HHIPQ96QV1 AC092119.3-201ENST00000612618 583 ntBASIC19.23■□□□□ 0.67
HHIPQ96QV1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.23■□□□□ 0.67
HHIPQ96QV1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HHIPQ96QV1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HHIPQ96QV1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HHIPQ96QV1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.23■□□□□ 0.67
HHIPQ96QV1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HHIPQ96QV1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.22■□□□□ 0.67
HHIPQ96QV1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HHIPQ96QV1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HHIPQ96QV1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.22■□□□□ 0.67
HHIPQ96QV1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HHIPQ96QV1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HHIPQ96QV1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HHIPQ96QV1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HHIPQ96QV1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.22■□□□□ 0.67
HHIPQ96QV1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.22■□□□□ 0.67
HHIPQ96QV1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HHIPQ96QV1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HHIPQ96QV1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HHIPQ96QV1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.22■□□□□ 0.67
HHIPQ96QV1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HHIPQ96QV1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HHIPQ96QV1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HHIPQ96QV1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HHIPQ96QV1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HHIPQ96QV1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HHIPQ96QV1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HHIPQ96QV1 AC007952.6-201ENST00000573168 2673 ntBASIC19.21■□□□□ 0.67
HHIPQ96QV1 AC003957.1-201ENST00000625108 2673 ntBASIC19.21■□□□□ 0.67
HHIPQ96QV1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HHIPQ96QV1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.21■□□□□ 0.67
HHIPQ96QV1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.21■□□□□ 0.67
HHIPQ96QV1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.21■□□□□ 0.67
HHIPQ96QV1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HHIPQ96QV1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HHIPQ96QV1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HHIPQ96QV1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.21■□□□□ 0.67
HHIPQ96QV1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HHIPQ96QV1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.21■□□□□ 0.67
HHIPQ96QV1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.21■□□□□ 0.67
HHIPQ96QV1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HHIPQ96QV1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HHIPQ96QV1 CR769767.2-201ENST00000622735 460 ntBASIC19.21■□□□□ 0.67
HHIPQ96QV1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
HHIPQ96QV1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HHIPQ96QV1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HHIPQ96QV1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
HHIPQ96QV1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HHIPQ96QV1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.21■□□□□ 0.67
HHIPQ96QV1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HHIPQ96QV1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HHIPQ96QV1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.2■□□□□ 0.66
HHIPQ96QV1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.2■□□□□ 0.66
HHIPQ96QV1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HHIPQ96QV1 AC009237.14-201ENST00000609975 1594 ntBASIC19.2■□□□□ 0.66
HHIPQ96QV1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.2■□□□□ 0.66
HHIPQ96QV1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HHIPQ96QV1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HHIPQ96QV1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HHIPQ96QV1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HHIPQ96QV1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HHIPQ96QV1 TSPY21P-201ENST00000433481 731 ntBASIC19.2■□□□□ 0.66
HHIPQ96QV1 TSPY23P-201ENST00000440136 739 ntBASIC19.2■□□□□ 0.66
HHIPQ96QV1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.2■□□□□ 0.66
HHIPQ96QV1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HHIPQ96QV1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.2■□□□□ 0.66
HHIPQ96QV1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.2■□□□□ 0.66
HHIPQ96QV1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HHIPQ96QV1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
HHIPQ96QV1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.2■□□□□ 0.66
HHIPQ96QV1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HHIPQ96QV1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HHIPQ96QV1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.19■□□□□ 0.66
HHIPQ96QV1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HHIPQ96QV1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HHIPQ96QV1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HHIPQ96QV1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HHIPQ96QV1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HHIPQ96QV1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HHIPQ96QV1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HHIPQ96QV1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HHIPQ96QV1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.19■□□□□ 0.66
HHIPQ96QV1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HHIPQ96QV1 AL645929.1-201ENST00000420084 975 ntBASIC19.19■□□□□ 0.66
HHIPQ96QV1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HHIPQ96QV1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms