Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3tc2Q80VA5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Gm7506-201ENSMUST00000207758 815 ntBASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3tc2Q80VA5 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Gm25990-201ENSMUST00000102440 86 ntBASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Gm15590-201ENSMUST00000078419 552 ntBASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3tc2Q80VA5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 Gm7230-201ENSMUST00000173026 815 ntBASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3tc2Q80VA5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Gm23935-201ENSMUST00000102303 57 ntBASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Gm24270-201ENSMUST00000102326 57 ntBASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Gm24245-201ENSMUST00000157318 57 ntBASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Gm4535-201ENSMUST00000182274 558 ntBASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Gm10355-201ENSMUST00000097146 517 ntBASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3tc2Q80VA5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3tc2Q80VA5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sh3tc2Q80VA5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3tc2Q80VA5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3tc2Q80VA5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3tc2Q80VA5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.53■□□□□ 0.4
Sh3tc2Q80VA5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3tc2Q80VA5 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.53■□□□□ 0.4
Sh3tc2Q80VA5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3tc2Q80VA5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3tc2Q80VA5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms