Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scarb1Q61009 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.68□□□□□ -0.22
Scarb1Q61009 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Scarb1Q61009 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scarb1Q61009 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.67□□□□□ -0.22
Scarb1Q61009 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scarb1Q61009 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.67□□□□□ -0.22
Scarb1Q61009 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Scarb1Q61009 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Gm43183-201ENSMUST00000200632 547 ntBASIC13.67□□□□□ -0.22
Scarb1Q61009 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.67□□□□□ -0.22
Scarb1Q61009 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.67□□□□□ -0.22
Scarb1Q61009 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scarb1Q61009 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scarb1Q61009 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scarb1Q61009 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scarb1Q61009 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scarb1Q61009 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.66□□□□□ -0.22
Scarb1Q61009 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.66□□□□□ -0.22
Scarb1Q61009 Gm18666-201ENSMUST00000190039 958 ntBASIC13.66□□□□□ -0.22
Scarb1Q61009 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.66□□□□□ -0.22
Scarb1Q61009 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scarb1Q61009 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scarb1Q61009 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scarb1Q61009 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scarb1Q61009 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scarb1Q61009 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scarb1Q61009 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.65□□□□□ -0.22
Scarb1Q61009 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.65□□□□□ -0.22
Scarb1Q61009 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scarb1Q61009 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.65□□□□□ -0.22
Scarb1Q61009 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.65□□□□□ -0.22
Scarb1Q61009 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Scarb1Q61009 Gm10602-201ENSMUST00000098239 609 ntBASIC13.65□□□□□ -0.22
Scarb1Q61009 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.65□□□□□ -0.22
Scarb1Q61009 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scarb1Q61009 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scarb1Q61009 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.65□□□□□ -0.22
Scarb1Q61009 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scarb1Q61009 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.65□□□□□ -0.22
Scarb1Q61009 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scarb1Q61009 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Scarb1Q61009 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Scarb1Q61009 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.64□□□□□ -0.23
Scarb1Q61009 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.64□□□□□ -0.23
Scarb1Q61009 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.64□□□□□ -0.23
Scarb1Q61009 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scarb1Q61009 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms