Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 AC010240.3-201ENST00000607688 395 ntBASIC31.08■■■□□ 2.57
SNAPC4Q5SXM2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 FAM197Y8-203ENST00000450145 560 ntBASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 AC073648.2-201ENST00000510116 352 ntBASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
SNAPC4Q5SXM2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 AL049840.3-201ENST00000602669 611 ntBASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC31.06■■■□□ 2.56
SNAPC4Q5SXM2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SNAPC4Q5SXM2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 PMS2P7-201ENST00000506558 1336 ntBASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 IGHV3-41-201ENST00000613121 348 ntBASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SNAPC4Q5SXM2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 KRT18P23-201ENST00000435622 1283 ntBASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SNAPC4Q5SXM2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
SNAPC4Q5SXM2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SNAPC4Q5SXM2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
SNAPC4Q5SXM2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC31.02■■■□□ 2.56
SNAPC4Q5SXM2 RN7SL606P-201ENST00000472779 293 ntBASIC31.02■■■□□ 2.56
SNAPC4Q5SXM2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC31.02■■■□□ 2.56
SNAPC4Q5SXM2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC31.02■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms