Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.41□□□□□ -0.26
Trim63Q38HM4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim63Q38HM4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim63Q38HM4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trim63Q38HM4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.39□□□□□ -0.27
Trim63Q38HM4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim63Q38HM4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.38□□□□□ -0.27
Trim63Q38HM4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms