Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 MIR3652-201ENST00000579335 131 ntBASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 AL162741.1-201ENST00000565563 1558 ntBASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 PKD1P6-201ENST00000343738 4769 ntBASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 BX276092.5-203ENST00000456199 560 ntBASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM71Q2Q1W2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 AC093525.10-201ENST00000625130 1569 ntBASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM71Q2Q1W2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRIM71Q2Q1W2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.7■□□□□ 0.91
TRIM71Q2Q1W2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 AC246785.2-201ENST00000432512 513 ntBASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 MIR3917-201ENST00000580971 93 ntBASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 AC112497.1-201ENST00000624824 639 ntBASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM71Q2Q1W2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 MIR662-201ENST00000384847 95 ntBASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 UNC93B7-201ENST00000509439 705 ntBASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 RN7SL510P-201ENST00000581311 263 ntBASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM71Q2Q1W2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms