Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rps28P62858 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Rps28P62858 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC9.62□□□□□ -0.87
Rps28P62858 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC9.62□□□□□ -0.87
Rps28P62858 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Rps28P62858 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Rps28P62858 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rps28P62858 Gm43205-201ENSMUST00000198622 1968 ntBASIC9.62□□□□□ -0.87
Rps28P62858 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Rps28P62858 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC9.62□□□□□ -0.87
Rps28P62858 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Rps28P62858 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rps28P62858 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rps28P62858 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Rps28P62858 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rps28P62858 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Rps28P62858 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.61□□□□□ -0.87
Rps28P62858 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Rps28P62858 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Gm44414-201ENSMUST00000203660 2109 ntBASIC9.61□□□□□ -0.87
Rps28P62858 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC9.61□□□□□ -0.87
Rps28P62858 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Rps28P62858 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Rps28P62858 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rps28P62858 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC9.61□□□□□ -0.87
Rps28P62858 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Rps28P62858 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Rps28P62858 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Rps28P62858 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Rps28P62858 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
Rps28P62858 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Rps28P62858 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Rps28P62858 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Gm5357-201ENSMUST00000212720 1924 ntBASIC9.6□□□□□ -0.87
Rps28P62858 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rps28P62858 Gm43570-201ENSMUST00000199951 3688 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms