Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Psmc3O88685 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Psmc3O88685 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Psmc3O88685 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Psmc3O88685 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Psmc3O88685 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.06■□□□□ 0.32
Psmc3O88685 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.06■□□□□ 0.32
Psmc3O88685 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Psmc3O88685 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.06■□□□□ 0.32
Psmc3O88685 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Psmc3O88685 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Psmc3O88685 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Psmc3O88685 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Psmc3O88685 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Psmc3O88685 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Psmc3O88685 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Psmc3O88685 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Psmc3O88685 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Psmc3O88685 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Psmc3O88685 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Psmc3O88685 Gm11779-201ENSMUST00000118541 368 ntBASIC17.05■□□□□ 0.32
Psmc3O88685 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Psmc3O88685 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.05■□□□□ 0.32
Psmc3O88685 Gm7230-201ENSMUST00000173026 815 ntBASIC17.05■□□□□ 0.32
Psmc3O88685 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.05■□□□□ 0.32
Psmc3O88685 Gm5264-201ENSMUST00000190584 848 ntBASIC17.05■□□□□ 0.32
Psmc3O88685 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.05■□□□□ 0.32
Psmc3O88685 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Psmc3O88685 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Psmc3O88685 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Psmc3O88685 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.05■□□□□ 0.32
Psmc3O88685 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Psmc3O88685 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Psmc3O88685 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.04■□□□□ 0.32
Psmc3O88685 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Psmc3O88685 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Psmc3O88685 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Psmc3O88685 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Psmc3O88685 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Psmc3O88685 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Psmc3O88685 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.04■□□□□ 0.32
Psmc3O88685 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.04■□□□□ 0.32
Psmc3O88685 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
Psmc3O88685 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.04■□□□□ 0.32
Psmc3O88685 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.04■□□□□ 0.32
Psmc3O88685 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.04■□□□□ 0.32
Psmc3O88685 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Psmc3O88685 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Psmc3O88685 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Psmc3O88685 Gm15590-201ENSMUST00000078419 552 ntBASIC17.04■□□□□ 0.32
Psmc3O88685 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Psmc3O88685 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Psmc3O88685 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Psmc3O88685 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.03■□□□□ 0.32
Psmc3O88685 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Psmc3O88685 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.03■□□□□ 0.32
Psmc3O88685 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Psmc3O88685 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Psmc3O88685 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Psmc3O88685 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Psmc3O88685 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.03■□□□□ 0.32
Psmc3O88685 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.03■□□□□ 0.32
Psmc3O88685 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.03■□□□□ 0.32
Psmc3O88685 Psmb5-202ENSMUST00000227257 622 ntBASIC17.03■□□□□ 0.32
Psmc3O88685 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.03■□□□□ 0.32
Psmc3O88685 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Psmc3O88685 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Psmc3O88685 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.03■□□□□ 0.32
Psmc3O88685 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Psmc3O88685 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Psmc3O88685 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Psmc3O88685 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Psmc3O88685 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.02■□□□□ 0.32
Psmc3O88685 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Psmc3O88685 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Psmc3O88685 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Psmc3O88685 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Psmc3O88685 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Psmc3O88685 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.02■□□□□ 0.32
Psmc3O88685 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms