Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tulp3O88413 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tulp3O88413 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tulp3O88413 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tulp3O88413 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tulp3O88413 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tulp3O88413 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tulp3O88413 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tulp3O88413 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tulp3O88413 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tulp3O88413 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tulp3O88413 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tulp3O88413 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tulp3O88413 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tulp3O88413 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Gm13186-201ENSMUST00000118031 316 ntBASIC15.11■□□□□ 0.01
Tulp3O88413 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tulp3O88413 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Tulp3O88413 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.1■□□□□ 0.01
Tulp3O88413 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Tulp3O88413 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tulp3O88413 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Gm12527-201ENSMUST00000117967 564 ntBASIC15.1■□□□□ 0.01
Tulp3O88413 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.1■□□□□ 0.01
Tulp3O88413 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.1■□□□□ 0.01
Tulp3O88413 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Tulp3O88413 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Tulp3O88413 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tulp3O88413 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tulp3O88413 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.09■□□□□ 0.01
Tulp3O88413 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.09■□□□□ 0.01
Tulp3O88413 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tulp3O88413 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.09■□□□□ 0.01
Tulp3O88413 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.09■□□□□ 0.01
Tulp3O88413 Timm23-208ENSMUST00000226683 750 ntBASIC15.09■□□□□ 0.01
Tulp3O88413 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tulp3O88413 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tulp3O88413 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tulp3O88413 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tulp3O88413 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tulp3O88413 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Tulp3O88413 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tulp3O88413 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tulp3O88413 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tulp3O88413 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tulp3O88413 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.08■□□□□ 0.01
Tulp3O88413 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tulp3O88413 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.08■□□□□ 0
Tulp3O88413 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tulp3O88413 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tulp3O88413 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tulp3O88413 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms