Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm21559-201ENSMUST00000220638 855 ntBASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm8587-201ENSMUST00000076538 843 ntBASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms