Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms