Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Gm18284-201ENSMUST00000172604 624 ntBASIC12.55□□□□□ -0.4
Trav16A0A075B653 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.55□□□□□ -0.4
Trav16A0A075B653 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16A0A075B653 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.54□□□□□ -0.4
Trav16A0A075B653 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.54□□□□□ -0.4
Trav16A0A075B653 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Gm37292-201ENSMUST00000192062 758 ntBASIC12.54□□□□□ -0.4
Trav16A0A075B653 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.54□□□□□ -0.4
Trav16A0A075B653 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16A0A075B653 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav16A0A075B653 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.53□□□□□ -0.4
Trav16A0A075B653 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Gm27000-201ENSMUST00000182943 842 ntBASIC12.53□□□□□ -0.4
Trav16A0A075B653 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Asic1-205ENSMUST00000228185 1818 ntBASIC12.53□□□□□ -0.4
Trav16A0A075B653 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16A0A075B653 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav16A0A075B653 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav16A0A075B653 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav16A0A075B653 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav16A0A075B653 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav16A0A075B653 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms