Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNU6-546P-201ENST00000383991 107 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 RNU6-611P-201ENST00000384276 104 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 MIR597-201ENST00000384968 97 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 RNU2-36P-201ENST00000410361 191 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 RNU4-22P-201ENST00000411058 166 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 AC092809.3-201ENST00000415453 231 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 EIF4EP2-201ENST00000422816 654 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 AL022400.1-201ENST00000423946 935 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 SDAD1P3-201ENST00000427380 333 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 AL583843.1-201ENST00000456070 346 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 AC109329.1-201ENST00000518744 317 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 AL670379.2-201ENST00000604983 252 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 AL670379.4-201ENST00000605279 254 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 Z82243.1-201ENST00000609432 473 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 AC009269.6-201ENST00000621778 588 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.42□□□□□ -2.18
USH1CQ9Y6N9 RNU6-395P-201ENST00000365662 106 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 SNORD14D-201ENST00000384390 87 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 RNU6-843P-201ENST00000384454 104 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 RNU2-62P-201ENST00000410868 191 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 UBE2V1P4-201ENST00000425374 344 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 MTCO2P20-201ENST00000437339 673 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 AL121601.2-201ENST00000438019 707 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 AL606517.1-201ENST00000446914 387 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 RPL23AP35-201ENST00000451906 501 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 TPT1P8-201ENST00000510120 555 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 PTP4A1P4-201ENST00000512479 322 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 MTCYBP33-201ENST00000575007 1130 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 AC136618.2-201ENST00000575091 400 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 MIR3198-2-201ENST00000577868 80 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 AC080013.3-201ENST00000606839 578 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 AC099842.1-201ENST00000619919 596 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 U1.36-201ENST00000620684 176 ntBASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
USH1CQ9Y6N9 RNU5E-10P-201ENST00000363506 118 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 RNU6-190P-201ENST00000384154 102 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 SNORA67.5-201ENST00000391036 107 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 RNA5SP501-201ENST00000410990 112 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 PIGPP2-201ENST00000411569 458 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 MTND3P1-201ENST00000441336 220 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 snoU109.2-201ENST00000459316 135 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 HMGB1P30-201ENST00000492455 606 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 SNORA44.1-201ENST00000517031 108 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 AC023050.2-201ENST00000544968 387 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 MIR3146-201ENST00000580367 79 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 AL391001.1-201ENST00000602747 715 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 AC016925.2-201ENST00000605108 242 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 AP000860.1-201ENST00000605250 559 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 AC016727.1-205ENST00000605437 569 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 MIR15A-201ENST00000607334 83 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 AC012360.2-201ENST00000609349 391 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 AL132822.1-201ENST00000617063 513 ntBASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
USH1CQ9Y6N9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 RNU6-655P-201ENST00000362858 107 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 RNU6-433P-201ENST00000363216 104 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 RNU6-529P-201ENST00000363383 104 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 Y_RNA.338-201ENST00000365320 114 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 SNORA75B-201ENST00000384053 137 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 AL365338.1-201ENST00000422282 858 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 SNORD13-201ENST00000459299 104 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 FAM206BP-201ENST00000510179 541 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 RNU6-965P-201ENST00000516721 96 ntBASIC1.39□□□□□ -2.19
USH1CQ9Y6N9 RNU6-1092P-201ENST00000516955 87 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms