Protein–RNA interactions for Protein: Q9Y5W8

SNX13, Sorting nexin-13, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13Q9Y5W8 AC012493.2-201ENST00000595083 291 ntBASIC3.19□□□□□ -1.9
SNX13Q9Y5W8 AC010620.2-201ENST00000600135 313 ntBASIC3.19□□□□□ -1.9
SNX13Q9Y5W8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX13Q9Y5W8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNX13Q9Y5W8 MIR378J-201ENST00000611988 109 ntBASIC3.19□□□□□ -1.9
SNX13Q9Y5W8 AC024581.2-201ENST00000619986 252 ntBASIC3.19□□□□□ -1.9
SNX13Q9Y5W8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX13Q9Y5W8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX13Q9Y5W8 AL109809.4-201ENST00000603520 2185 ntBASIC3.19□□□□□ -1.9
SNX13Q9Y5W8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 RNU6-1083P-201ENST00000384022 107 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 RNU6-692P-201ENST00000384496 107 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 RPL21P3-201ENST00000395517 478 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 RPL37P10-201ENST00000412884 288 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 RPL32P35-201ENST00000415214 394 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 ATG3P1-201ENST00000419507 911 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 NOTCH2P1-201ENST00000443481 624 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 AC124916.1-201ENST00000444020 547 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 RPL21P23-201ENST00000446654 460 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 U8.21-201ENST00000459536 136 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 AC146507.2-201ENST00000460608 476 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 RPS29P27-201ENST00000463711 170 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 AC116337.1-201ENST00000509680 687 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 MTND3P22-201ENST00000510932 243 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 RNU6-612P-201ENST00000516909 102 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 MIR4700-201ENST00000578311 74 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 MIR5685-201ENST00000579080 79 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 AC006557.5-201ENST00000603126 811 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 AL137843.1-201ENST00000605078 385 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 AC104985.2-201ENST00000620598 500 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 AC112487.2-201ENST00000637950 304 ntBASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SNX13Q9Y5W8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 SNORA68.1-201ENST00000364537 132 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 RNU6-593P-201ENST00000364716 112 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 Y_RNA.356-201ENST00000365475 113 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 SNORD21-201ENST00000383953 95 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 MIR517A-201ENST00000385001 87 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 RNU4-14P-201ENST00000410858 122 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 RNU6-1245P-201ENST00000411130 106 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 ATP5A1P2-201ENST00000412323 255 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 NUP35P1-201ENST00000422734 947 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AC115115.1-201ENST00000449927 248 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 PCMTD1P1-201ENST00000455560 355 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AC091179.1-201ENST00000461606 579 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AC006483.1-201ENST00000487308 313 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 RN7SL283P-201ENST00000489055 303 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AC007224.1-201ENST00000564410 144 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 RPL23AP78-201ENST00000599928 470 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AP001836.1-201ENST00000604675 523 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AC113139.1-201ENST00000605049 239 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AC124303.1-201ENST00000605703 360 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 MIR6128-201ENST00000615528 109 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 AL356274.2-201ENST00000624379 3752 ntBASIC3.17□□□□□ -1.9
SNX13Q9Y5W8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 U3.6-201ENST00000363622 211 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 RNU6-1140P-201ENST00000410517 106 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 AP000275.1-201ENST00000411943 390 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 SYF2P2-201ENST00000417620 583 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 AC009969.1-201ENST00000438726 172 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 DAP3P1-201ENST00000441522 278 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 AC009296.1-201ENST00000443146 155 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 Y_RNA.635-201ENST00000459041 101 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 RNU1-54P-201ENST00000517181 120 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 MIR2116-201ENST00000517221 80 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 C8orf59P2-201ENST00000603441 271 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 AC016727.1-205ENST00000605437 569 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 AC019193.3-201ENST00000609144 554 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 AC096772.1-201ENST00000609146 564 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 MIR1302-1-201ENST00000637932 143 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 AL359854.1-201ENST00000614203 1594 ntBASIC3.16□□□□□ -1.9
SNX13Q9Y5W8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNX13Q9Y5W8 RNU6-1010P-201ENST00000362757 107 ntBASIC3.15□□□□□ -1.91
SNX13Q9Y5W8 RNA5SP197-201ENST00000363357 119 ntBASIC3.15□□□□□ -1.91
SNX13Q9Y5W8 RNU1-140P-201ENST00000365040 165 ntBASIC3.15□□□□□ -1.91
SNX13Q9Y5W8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms