Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC021739.1-201ENST00000559631 174 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AC093249.1-201ENST00000567049 203 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 MIR4474-201ENST00000579189 78 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 SNORA51-201ENST00000606420 132 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AL157817.1-201ENST00000614264 790 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 MIR6075-201ENST00000620782 95 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 PLCE1P1-201ENST00000622094 305 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AC138627.2-201ENST00000624202 601 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-596P-201ENST00000365395 98 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 SNORD42.2-201ENST00000365570 69 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 Y_RNA.394-201ENST00000383942 103 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 RPS29P13-201ENST00000402041 169 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 Y_RNA.594-201ENST00000410373 140 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-325P-201ENST00000411132 105 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 USP9YP30-201ENST00000430729 455 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 DAP3P1-201ENST00000441522 278 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AC018437.1-201ENST00000492214 406 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AC097473.1-201ENST00000508142 408 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 MTCYBP40-201ENST00000509390 1135 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 RNA5SP217-201ENST00000515959 91 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 Y_RNA.670-201ENST00000516255 105 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 SNORA43.2-201ENST00000516652 128 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AC093331.1-201ENST00000521474 169 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AL442663.2-201ENST00000554385 511 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 MIR4444-1-201ENST00000581696 74 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 MIR4444-2-201ENST00000584390 74 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 HMGN2P15-201ENST00000585707 270 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 VN1R107P-201ENST00000601784 209 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 U3.45-201ENST00000607547 219 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AC005046.1-201ENST00000608515 625 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AC133104.2-201ENST00000615272 193 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 PISRT1.1-201ENST00000616930 107 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AL034408.1-202ENST00000636088 415 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AL669831.3-213ENST00000636676 183 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 AC007256.1-201ENST00000392253 2765 ntBASIC3.44□□□□□ -1.86
PCDHA3Q9Y5H8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 MTND4P23-201ENST00000447723 1363 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 RPL9P7-201ENST00000330965 580 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 Y_RNA.146-201ENST00000363549 102 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 RNU1-100P-201ENST00000365255 165 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-306P-201ENST00000384617 107 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 RNA5SP44-201ENST00000410446 133 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-1304P-201ENST00000411374 106 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 MTCO2P12-201ENST00000427426 682 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AL513043.1-201ENST00000439124 535 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 MTCYBP6-201ENST00000441810 138 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 Y_RNA.639-201ENST00000458981 102 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 RPL9P9-202ENST00000466501 579 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AP002884.2-201ENST00000471647 395 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC027575.1-201ENST00000481064 460 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC010265.1-201ENST00000513509 211 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC011494.1-201ENST00000596454 237 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC009314.1-201ENST00000603871 304 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC009229.3-201ENST00000608056 282 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC007742.2-201ENST00000618226 398 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC090971.5-201ENST00000621102 293 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC099654.10-201ENST00000640395 161 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC233263.6-201ENST00000631132 1963 ntBASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHA3Q9Y5H8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-310P-201ENST00000384655 107 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 RNA5SP171-201ENST00000391071 115 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 Y_RNA.646-201ENST00000410980 101 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AL133396.1-201ENST00000432048 687 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AC236972.1-201ENST00000433225 199 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 HMGN2P20-201ENST00000437531 273 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 FTH1P25-201ENST00000447665 469 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AL358232.1-201ENST00000448030 501 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms