Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNU6-762P-201ENST00000517107 102 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 AC233702.9-201ENST00000581528 203 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 AC011471.1-201ENST00000585766 187 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 AL021997.2-201ENST00000615674 271 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 ADAM3A-203ENST00000461344 2157 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 Z73965.1-201ENST00000623412 2297 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 SNORD114-19-201ENST00000363072 75 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 RNU6-640P-201ENST00000363693 105 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 Y_RNA.348-201ENST00000365403 103 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 RNU6-19P-201ENST00000384718 107 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 SNORA48.5-201ENST00000391143 135 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 AC092047.1-201ENST00000424997 240 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 RPL35AP21-201ENST00000437667 333 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 Y_RNA.649-201ENST00000459077 103 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 AC010285.1-201ENST00000470580 392 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 AC093331.1-201ENST00000521474 169 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 CYP4A27P-201ENST00000567218 190 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 AC006065.5-201ENST00000623427 349 ntBASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PCDHB3Q9Y5E6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.96□□□□□ -1.61
PCDHB3Q9Y5E6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
PCDHB3Q9Y5E6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 SNURFL-201ENST00000309296 343 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 RNA5SP90-201ENST00000364801 99 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 RNU6-1275P-201ENST00000391087 107 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 U3.26-201ENST00000391236 204 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 MIR208B-201ENST00000401172 77 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 RPS29P10-201ENST00000439197 166 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 RPS26P45-201ENST00000471748 340 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 NIP7P2-201ENST00000485801 544 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 RNU6-781P-201ENST00000516377 101 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 BNIP3P1-201ENST00000547295 580 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 AC015914.2-201ENST00000618167 288 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 AC106871.1-201ENST00000568324 3102 ntBASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHB3Q9Y5E6 Z95331.1-201ENST00000623075 23112 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 RNU1-73P-201ENST00000383971 164 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 Y_RNA.558-201ENST00000384685 113 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 MIR325-201ENST00000385260 98 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 AC009238.2-201ENST00000431026 355 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 AC004386.2-201ENST00000441858 148 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 AC006463.2-201ENST00000473326 348 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 RN7SL346P-201ENST00000491561 294 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 AC091178.2-201ENST00000584401 117 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 RN7SL435P-201ENST00000584418 282 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 FAM25E-202ENST00000608562 189 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 FTX_3.1-201ENST00000610451 147 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 AC091953.3-201ENST00000623220 236 ntBASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms