Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SNORA3.4-201ENST00000515969 96 ntBASIC0.2□□□□□ -2.38
AP4S1Q9Y587 RNA5SP134-201ENST00000516492 96 ntBASIC0.2□□□□□ -2.38
AP4S1Q9Y587 RNU6-840P-201ENST00000517275 65 ntBASIC0.2□□□□□ -2.38
AP4S1Q9Y587 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.2□□□□□ -2.38
AP4S1Q9Y587 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.2□□□□□ -2.38
AP4S1Q9Y587 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.2□□□□□ -2.38
AP4S1Q9Y587 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.2□□□□□ -2.38
AP4S1Q9Y587 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.2□□□□□ -2.38
AP4S1Q9Y587 AC005858.4-201ENST00000623191 700 ntBASIC0.2□□□□□ -2.38
AP4S1Q9Y587 AC068787.1-201ENST00000623908 691 ntBASIC0.2□□□□□ -2.38
AP4S1Q9Y587 MIR4275-201ENST00000636486 87 ntBASIC0.2□□□□□ -2.38
AP4S1Q9Y587 AL592310.1-201ENST00000414330 671 ntBASIC0.19□□□□□ -2.38
AP4S1Q9Y587 RPL21P111-201ENST00000418453 477 ntBASIC0.19□□□□□ -2.38
AP4S1Q9Y587 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.19□□□□□ -2.38
AP4S1Q9Y587 FTH1P12-201ENST00000432137 551 ntBASIC0.19□□□□□ -2.38
AP4S1Q9Y587 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.19□□□□□ -2.38
AP4S1Q9Y587 AC010631.1-201ENST00000474150 156 ntBASIC0.19□□□□□ -2.38
AP4S1Q9Y587 RN7SKP49-201ENST00000516675 260 ntBASIC0.19□□□□□ -2.38
AP4S1Q9Y587 ACA59.2-201ENST00000517061 156 ntBASIC0.19□□□□□ -2.38
AP4S1Q9Y587 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.19□□□□□ -2.38
AP4S1Q9Y587 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.19□□□□□ -2.38
AP4S1Q9Y587 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.19□□□□□ -2.38
AP4S1Q9Y587 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.19□□□□□ -2.38
AP4S1Q9Y587 LARP7P2-201ENST00000575306 125 ntBASIC0.19□□□□□ -2.38
AP4S1Q9Y587 AC112220.2-201ENST00000605513 533 ntBASIC0.19□□□□□ -2.38
AP4S1Q9Y587 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.19□□□□□ -2.38
AP4S1Q9Y587 MIR6516-201ENST00000630554 81 ntBASIC0.19□□□□□ -2.38
AP4S1Q9Y587 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.19□□□□□ -2.38
AP4S1Q9Y587 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.19□□□□□ -2.38
AP4S1Q9Y587 MIR194-1-201ENST00000384892 85 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 RNU6-77P-201ENST00000410554 91 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 MTCO2P12-201ENST00000427426 682 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.18□□□□□ -2.38
AP4S1Q9Y587 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC130509.1-201ENST00000464158 433 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 RPS29P1-201ENST00000465274 159 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC093259.1-201ENST00000509755 300 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.18□□□□□ -2.38
AP4S1Q9Y587 RNU6-165P-201ENST00000517170 99 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC008127.2-201ENST00000549925 1075 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC091489.2-201ENST00000566263 604 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC091057.3-201ENST00000602684 733 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AL355598.1-201ENST00000604169 202 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC090578.1-201ENST00000604955 591 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC098614.4-201ENST00000607601 462 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC009237.15-201ENST00000610252 501 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC093913.1-201ENST00000614178 329 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AL118556.2-201ENST00000614375 824 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 AC243829.3-201ENST00000622177 108 ntBASIC0.18□□□□□ -2.38
AP4S1Q9Y587 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
AP4S1Q9Y587 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AL391994.1-201ENST00000254724 282 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.17□□□□□ -2.38
AP4S1Q9Y587 RNU6-743P-201ENST00000364151 106 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 Y_RNA.245-201ENST00000364493 95 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 RNU1-119P-201ENST00000391122 165 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AC063976.4-201ENST00000421971 163 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AC010153.1-201ENST00000432862 727 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AL591212.2-201ENST00000433923 257 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AC002429.1-201ENST00000437672 148 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.17□□□□□ -2.38
AP4S1Q9Y587 NDUFA5P7-201ENST00000452914 242 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 RNA5SP269-201ENST00000459032 137 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AC010460.2-201ENST00000509054 677 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AC067942.3-201ENST00000512025 362 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 IGJP1-201ENST00000522682 475 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AC025423.5-201ENST00000550230 219 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AL121579.1-201ENST00000555129 305 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 MIR5000-201ENST00000577717 103 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 MIR5094-201ENST00000578766 85 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AC016727.2-201ENST00000603988 621 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AC004853.1-201ENST00000604902 698 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AL353765.1-201ENST00000605514 183 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 RNU6-91P-201ENST00000607774 107 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AC034229.4-201ENST00000607861 441 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 AL590240.4-201ENST00000616908 390 ntBASIC0.17□□□□□ -2.38
AP4S1Q9Y587 ZNF849P-201ENST00000594711 1566 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 RNU6-115P-201ENST00000364310 107 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 SNORD114-22-201ENST00000365423 72 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 VTRNA1-3-201ENST00000365645 89 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 MIR200A-201ENST00000384875 90 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 FTH1P15-201ENST00000406984 280 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 RNU2-7P-201ENST00000410794 178 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 AC104651.1-201ENST00000427559 735 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 ATP5EP1-201ENST00000510257 156 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 RNU6-416P-201ENST00000516265 103 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 RNU6-965P-201ENST00000516721 96 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.16□□□□□ -2.38
AP4S1Q9Y587 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.16□□□□□ -2.38
AP4S1Q9Y587 uc_338.15-201ENST00000615470 191 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 MIR6788-201ENST00000618842 66 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 AC009269.6-201ENST00000621778 588 ntBASIC0.16□□□□□ -2.38
AP4S1Q9Y587 RNU6-707P-201ENST00000364647 95 ntBASIC0.15□□□□□ -2.39
AP4S1Q9Y587 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms