Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 SNORA43.2-201ENST00000516652 128 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 COPS8P3-201ENST00000526024 482 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 AP003034.1-201ENST00000534621 422 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 AP002770.2-201ENST00000543613 532 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 MIR3169-201ENST00000578032 83 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 MTND3P19-201ENST00000603825 345 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 AC112187.2-201ENST00000604345 283 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 BNIP3P31-201ENST00000604515 566 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 OR2AS2P-201ENST00000606902 342 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 AL590240.4-201ENST00000616908 390 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 BTF3L4P1-201ENST00000413813 468 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AC027124.2-201ENST00000428249 105 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 HMGB1P31-201ENST00000437242 427 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 USP9YP17-201ENST00000444617 696 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AC079448.1-201ENST00000449377 373 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 MTND2P39-201ENST00000457230 764 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 RNU6-333P-201ENST00000459117 107 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AC007182.2-201ENST00000489251 402 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AC099513.1-201ENST00000490423 301 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 RNU6-902P-201ENST00000517212 91 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 RRN3P3-201ENST00000549207 578 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AC024614.2-201ENST00000577584 372 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AC091135.1-201ENST00000585943 307 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AL158042.1-201ENST00000605338 460 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AL355802.3-201ENST00000607571 545 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AC018645.2-201ENST00000609151 472 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AC097478.2-201ENST00000610572 514 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 RMST_4.1-201ENST00000616886 107 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 MIR8063-201ENST00000621930 81 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 AL049777.1-201ENST00000622740 518 ntBASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHTOPQ9Y3Y2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AL445523.1-201ENST00000451184 1362 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 RNU6-1179P-201ENST00000384667 107 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 EBAG9P1-201ENST00000418955 543 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 MTCO3P46-201ENST00000425787 232 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 FTH1P12-201ENST00000432137 551 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AC104982.1-201ENST00000478775 574 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 RPL9P6-201ENST00000492764 598 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AC098862.1-201ENST00000504991 413 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 RNA5SP148-201ENST00000516527 94 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 RNA5SP490-201ENST00000517141 136 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 ADI1P3-201ENST00000549509 470 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 SUB1P4-201ENST00000566062 339 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AL136363.2-201ENST00000604173 851 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AC025754.2-201ENST00000606491 432 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AC108747.1-201ENST00000609508 535 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 MIR6817-201ENST00000615588 66 ntBASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.39□□□□□ -2.19
CHTOPQ9Y3Y2 AC073343.1-201ENST00000328239 651 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AC062016.1-201ENST00000355719 319 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 RNU6-433P-201ENST00000363216 104 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 RNU5E-10P-201ENST00000363506 118 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 SNORA62.1-201ENST00000364287 154 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AL355143.1-201ENST00000407101 841 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 RAP1BP3-201ENST00000407180 549 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 SNORA11.4-201ENST00000408823 129 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AL353777.1-201ENST00000425552 326 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AC130509.1-201ENST00000464158 433 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 RPL36AP21-201ENST00000490372 323 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 RPS29P11-201ENST00000496507 171 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 RNA5SP281-201ENST00000516504 135 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AC080013.3-201ENST00000606839 578 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AL159153.1-201ENST00000619688 317 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 YWHAEP7-203ENST00000622054 312 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AC010149.2-201ENST00000637608 315 ntBASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
CHTOPQ9Y3Y2 AP000560.1-201ENST00000624150 1937 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms