Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RNU4-12P-201ENST00000365233 139 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 RNU6-45P-201ENST00000384471 107 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 RNU6-360P-201ENST00000390944 104 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 RNU2-7P-201ENST00000410794 178 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 MTCO2P12-201ENST00000427426 682 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 GTF2IP13-201ENST00000438487 386 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 NEFMP1-201ENST00000443423 1006 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 AC084024.2-201ENST00000503480 791 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 RNU6-586P-201ENST00000517265 104 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 AC015688.6-201ENST00000577737 104 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 SNORD39.3-201ENST00000584451 71 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 AC090578.1-201ENST00000604955 591 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 AP000654.2-201ENST00000605633 586 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 AC107075.1-201ENST00000613695 314 ntBASIC0.14□□□□□ -2.39
UBE2D4Q9Y2X8 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 AC119751.3-201ENST00000399720 670 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 MTCO1P56-201ENST00000401674 224 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 RNA5SP511-201ENST00000410487 115 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 EBAG9P1-201ENST00000418955 543 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 SNRPEP9-201ENST00000436794 238 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 AP003355.1-201ENST00000518956 587 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 AC025423.5-201ENST00000550230 219 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 MIR1273G-201ENST00000577677 100 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 RPL30P11-203ENST00000598995 310 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 MIR6134-201ENST00000617606 109 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 AC009509.4-201ENST00000619202 509 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 MIR7111-201ENST00000619751 72 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 AC068205.3-201ENST00000636385 468 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 AC106858.1-201ENST00000637497 429 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 MTND4P14-201ENST00000435799 1354 ntBASIC0.13□□□□□ -2.39
UBE2D4Q9Y2X8 U3.9-201ENST00000363823 204 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 Y_RNA.255-201ENST00000364581 97 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 RNU6-945P-201ENST00000383947 107 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 RNU2-32P-201ENST00000411193 191 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 RPL26P27-201ENST00000414397 437 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 AL022400.1-201ENST00000423946 935 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 AL589872.1-201ENST00000426602 288 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 AC010631.1-201ENST00000474150 156 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 RNA5SP480-201ENST00000516840 109 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 RNU6-1092P-201ENST00000516955 87 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 RNA5SP503-201ENST00000517047 117 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 APOOP3-201ENST00000536787 586 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 MIR4514-201ENST00000581410 57 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 CLIC4P2-201ENST00000601934 717 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 AL132822.1-201ENST00000617063 513 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 MIR924-201ENST00000638017 53 ntBASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
UBE2D4Q9Y2X8 AC092447.10-201ENST00000620607 1652 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 AL121978.1-201ENST00000402778 359 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 RNA5SP193-201ENST00000410353 107 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 MTCYBP38-201ENST00000417160 1123 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 TIMM9P1-201ENST00000436122 256 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 AL583843.1-201ENST00000456070 346 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 MTCO3P2-201ENST00000457365 171 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 RPL30P1-201ENST00000488676 339 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 COX7A2P2-201ENST00000505291 250 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 ARL2BPP5-201ENST00000523141 481 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 AC136619.2-201ENST00000563361 631 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 MIR3664-201ENST00000579074 99 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 AC091057.3-201ENST00000602684 733 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 AC018618.2-201ENST00000604770 446 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 AP001596.2-201ENST00000608410 312 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 AC017083.3-201ENST00000609955 700 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 AC093913.1-201ENST00000614178 329 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 AL158163.2-201ENST00000619110 700 ntBASIC0.11□□□□□ -2.39
UBE2D4Q9Y2X8 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 AL391994.1-201ENST00000254724 282 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 RNU6-582P-201ENST00000362989 107 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 RNU6-23P-201ENST00000363283 107 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 RNU6-716P-201ENST00000365621 103 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 MIR200A-201ENST00000384875 90 ntBASIC0.1□□□□□ -2.39
UBE2D4Q9Y2X8 RPL22P22-201ENST00000395439 379 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms