Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AL669831.1-202ENST00000428504 417 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 IFNA20P-201ENST00000436840 528 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 GTF2IP13-201ENST00000438487 386 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 PRPS1P1-201ENST00000445305 876 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 CECR9-201ENST00000453421 199 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 RPL12P25-201ENST00000455592 494 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 SNORD109B-201ENST00000458961 67 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 SNORD109A-201ENST00000459128 67 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 FAM206BP-201ENST00000510179 541 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 AC008716.1-201ENST00000511084 513 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 AC114781.4-201ENST00000513707 639 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 HMGN2P15-201ENST00000585707 270 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 Y_RNA.804-201ENST00000615262 101 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 AC103705.1-201ENST00000619013 241 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 UCA1.1-201ENST00000620952 75 ntBASIC4.48□□□□□ -1.69
CDK11AQ9UQ88 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 Y_RNA.166-201ENST00000363730 102 ntBASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 Y_RNA.480-201ENST00000384364 102 ntBASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 AC098614.2-201ENST00000426040 255 ntBASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 SNRPEP9-201ENST00000436794 238 ntBASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 AC093019.1-201ENST00000443135 252 ntBASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 UBBP3-201ENST00000445497 241 ntBASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 HMGB1P30-201ENST00000492455 606 ntBASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 RNA5SP165-201ENST00000517142 115 ntBASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 AP000763.2-201ENST00000540641 163 ntBASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 VN1R80P-201ENST00000597126 338 ntBASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 AC009994.1-201ENST00000606889 253 ntBASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.47□□□□□ -1.69
CDK11AQ9UQ88 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDK11AQ9UQ88 SNORD113-7-201ENST00000363762 77 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 RNU6-884P-201ENST00000363889 107 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 RNU6-1025P-201ENST00000410629 104 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AL358075.3-201ENST00000426289 226 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AL365400.1-201ENST00000431854 640 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AC009296.1-201ENST00000443146 155 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 DYNLL1P5-201ENST00000467158 270 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AC083904.1-201ENST00000487828 231 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 TRBVA-201ENST00000498804 316 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 SEM1P1-201ENST00000506694 209 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 RNU6-507P-201ENST00000516045 100 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AC107953.1-201ENST00000522216 297 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AC025281.1-201ENST00000567026 265 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 MIR4435-1-201ENST00000582552 80 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AC012119.1-201ENST00000603184 222 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AC004805.2-201ENST00000605382 482 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 LARP7P1-201ENST00000605576 316 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 AC009487.2-201ENST00000420969 6821 ntBASIC4.46□□□□□ -1.7
CDK11AQ9UQ88 RNU6-1013P-201ENST00000384180 107 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 RPS4XP7-201ENST00000406274 780 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 RAP1BP3-201ENST00000407180 549 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 MTND3P8-201ENST00000412909 339 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 RPL7P37-201ENST00000425095 738 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 NDUFA5P4-201ENST00000436704 385 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 SNRPEP8-201ENST00000442866 260 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 MTND1P11-201ENST00000456661 876 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 RPL21P93-201ENST00000480465 489 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 RNA5SP380-201ENST00000517190 98 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 AC090115.3-201ENST00000553218 849 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 AC005668.1-201ENST00000571142 476 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 AL355877.2-201ENST00000603670 358 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 AL022345.1-201ENST00000607292 135 ntBASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK11AQ9UQ88 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 MIR578-201ENST00000384828 96 ntBASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 RPLP0P7-201ENST00000416050 667 ntBASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 AC245166.1-201ENST00000521012 253 ntBASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 CYCSP27-201ENST00000527643 293 ntBASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 BNIP3P25-201ENST00000596023 559 ntBASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 AC005261.5-201ENST00000596280 355 ntBASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 AC019159.1-201ENST00000605094 187 ntBASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 DUSP12P1-201ENST00000612874 516 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms