Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 USP9YP11-201ENST00000427537 717 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 DPPA3P1-201ENST00000448050 469 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AL158050.2-201ENST00000605336 568 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 MIR6130-201ENST00000619419 109 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 MIR548AH-201ENST00000637109 76 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 SNORA25.3-201ENST00000363205 127 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 SNORA1.3-201ENST00000384676 136 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RPS15AP27-201ENST00000449183 343 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC010285.1-201ENST00000470580 392 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RNU1-61P-201ENST00000516107 151 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AK6P2-201ENST00000549020 471 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AL136363.2-201ENST00000604173 851 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RNU1-58P-201ENST00000362413 163 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.212-201ENST00000364177 102 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC010099.1-201ENST00000455434 375 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC118282.2-201ENST00000508739 374 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 MTND5P4-201ENST00000514978 288 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC091489.2-201ENST00000566263 604 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC019131.2-201ENST00000609071 870 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 MIR371B-201ENST00000638082 66 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RNU6-777P-201ENST00000364265 104 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.519-201ENST00000384553 102 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 MIR525-201ENST00000384978 85 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 SFR1P1-201ENST00000403720 688 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 Z75741.2-201ENST00000417272 1167 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC010154.1-201ENST00000425857 269 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC104308.1-201ENST00000454621 333 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC010469.2-201ENST00000496412 480 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 SCARNA8-201ENST00000515924 131 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 MIR6718-201ENST00000616153 80 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RNU6-79P-201ENST00000362511 107 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.449-201ENST00000384187 102 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RNU6-24P-201ENST00000384440 107 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RNU6-1241P-201ENST00000384536 107 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RNU6-376P-201ENST00000384731 106 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 MIR1298-201ENST00000408783 112 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RPS6P12-201ENST00000432491 726 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC023424.2-201ENST00000493479 777 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RNU6-415P-201ENST00000516252 97 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AL845331.3-202ENST00000562856 261 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC090666.1-201ENST00000578241 445 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC242498.1-201ENST00000604134 111 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AL356157.2-201ENST00000605122 111 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RNU6-487P-201ENST00000365430 104 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 FCF1P6-201ENST00000456841 595 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 VWA8P1-201ENST00000510889 176 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC005832.3-201ENST00000537929 631 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC122134.1-202ENST00000569111 1201 ntBASIC0.26□□□□□ -2.37
MACF1Q9UPN3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.26□□□□□ -2.37
MACF1Q9UPN3 RNY4P9-201ENST00000363194 97 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 RNU4-10P-201ENST00000364383 140 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 MIR545-201ENST00000385085 106 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 AF228730.1-201ENST00000397972 663 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 VN1R81P-201ENST00000602085 372 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.25□□□□□ -2.37
MACF1Q9UPN3 MTND4P21-201ENST00000453886 1357 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 RNU6-858P-201ENST00000362436 107 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.481-201ENST00000384373 102 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 RNU6-809P-201ENST00000384461 107 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 CALM2P3-201ENST00000400429 449 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 MLLT10P1-201ENST00000418346 262 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.25□□□□□ -2.37
MACF1Q9UPN3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.25□□□□□ -2.37
MACF1Q9UPN3 SNORD126-201ENST00000459475 77 ntBASIC0.25□□□□□ -2.37
MACF1Q9UPN3 RPL26P26-201ENST00000480251 434 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms