Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 MTATP6P18-201ENST00000417994 673 ntBASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 AC092001.1-201ENST00000453012 261 ntBASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 MTAPP1-201ENST00000489154 819 ntBASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 FAM92A1P2-202ENST00000504766 877 ntBASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 RNA5SP503-201ENST00000517047 117 ntBASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 AC092325.1-201ENST00000566449 554 ntBASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 AC005609.4-201ENST00000625071 447 ntBASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 MIR219B-201ENST00000637023 88 ntBASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 CDC27P3-201ENST00000635418 1910 ntBASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.32□□□□□ -1.72
SHROOM4Q9ULL8 Y_RNA.118-201ENST00000363300 101 ntBASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 RNU6-1029P-201ENST00000384109 107 ntBASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 SNORA41-201ENST00000384675 132 ntBASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 AL596276.1-201ENST00000434465 418 ntBASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 AC112206.3-201ENST00000514578 389 ntBASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 AC007684.1-201ENST00000609671 477 ntBASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 AL359740.1-201ENST00000624340 592 ntBASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 MTND5P30-201ENST00000452896 1731 ntBASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM4Q9ULL8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 AC002486.1-201ENST00000435098 391 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 MTND1P18-201ENST00000448191 573 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 AL583843.1-201ENST00000456070 346 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 MTND3P5-201ENST00000512798 333 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 RNU6-405P-201ENST00000516637 110 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 AC025449.1-201ENST00000603896 529 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 AC080013.6-201ENST00000606185 215 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 SNORD56.5-201ENST00000364281 72 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 AC073464.1-201ENST00000429823 534 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 AL122001.1-201ENST00000457027 370 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 GMFBP1-201ENST00000467831 427 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 AC091805.2-201ENST00000603848 235 ntBASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.3□□□□□ -1.72
SHROOM4Q9ULL8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 RNU6-748P-201ENST00000384648 107 ntBASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 U3.37-201ENST00000408528 213 ntBASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 BTF3L4P1-201ENST00000413813 468 ntBASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 RPS15AP9-201ENST00000439856 381 ntBASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 AC012308.1-201ENST00000451232 178 ntBASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 RPS27P27-201ENST00000498779 255 ntBASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 MIR3616-201ENST00000584070 92 ntBASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 Z99129.1-201ENST00000612510 255 ntBASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM4Q9ULL8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 SNORA67.3-201ENST00000384366 140 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 MIR518D-201ENST00000385014 87 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 MIR221-201ENST00000385135 110 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 RN7SKP32-201ENST00000410167 303 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 RNU2-9P-201ENST00000410194 145 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 RNU6-1140P-201ENST00000410517 106 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 NDUFB4P5-201ENST00000415445 361 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 Z82205.1-201ENST00000428456 297 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 AC107626.1-201ENST00000471084 183 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 LRRC34P2-201ENST00000514850 553 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 FAM92A1P1-201ENST00000528023 890 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 MIR3117-201ENST00000584034 78 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 AC087683.1-201ENST00000591187 441 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 AC104073.3-201ENST00000610942 955 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 TP73-AS1.1-201ENST00000611447 161 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 MIR8070-201ENST00000616510 88 ntBASIC4.28□□□□□ -1.72
SHROOM4Q9ULL8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 Y_RNA.194-201ENST00000363985 102 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 SET-203ENST00000372688 801 ntTSL 2 BASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 MIR578-201ENST00000384828 96 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 AL513475.1-201ENST00000406602 315 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 RNU2-25P-201ENST00000411041 191 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 FABP5P14-201ENST00000437273 393 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 RPL22P13-201ENST00000493291 347 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 ACA59.2-201ENST00000517061 156 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 MTND1P15-201ENST00000579262 949 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms