Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AL138825.1-201ENST00000618587 192 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 AC006111.3-201ENST00000622137 383 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 AL078596.1-201ENST00000624856 447 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DDX41Q9UJV9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX41Q9UJV9 AC007496.3-201ENST00000624987 3443 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 CDC27P3-201ENST00000635418 1910 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RNA5SP295-201ENST00000362655 121 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RNU6-942P-201ENST00000363002 107 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RNU6-99P-201ENST00000364721 107 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RNU1-100P-201ENST00000365255 165 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 SNORD116-20-201ENST00000384529 92 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 Y_RNA.533-201ENST00000384596 114 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 MIR625-201ENST00000385047 85 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RNU6-700P-201ENST00000391043 107 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RPS3AP46-201ENST00000448352 682 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RPS29P20-201ENST00000489592 171 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 AC021739.1-201ENST00000559631 174 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 MIR4680-201ENST00000580906 66 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 AC005014.2-201ENST00000607795 599 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 AC119674.1-207ENST00000641355 633 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 Y_RNA.496-201ENST00000384444 101 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 RNU6-1156P-201ENST00000410365 100 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 RNU2-23P-201ENST00000410545 195 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AL591424.2-201ENST00000617023 128 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AC024581.2-201ENST00000619986 252 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 MTND5P16-201ENST00000460269 1703 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AC005592.1-201ENST00000566527 1640 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
DDX41Q9UJV9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 RNA5SP51-201ENST00000364750 119 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 RNU6-985P-201ENST00000410182 104 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AP000275.1-201ENST00000411943 390 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC113618.1-201ENST00000416747 285 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC007098.1-201ENST00000420122 367 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC106707.2-201ENST00000484182 374 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 RNU6-475P-201ENST00000516073 104 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AP000889.1-201ENST00000530968 660 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 CR383656.8-201ENST00000549046 145 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 MIR5696-201ENST00000578474 85 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC008121.3-201ENST00000618726 433 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 U3.6-201ENST00000363622 211 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RNU6-595P-201ENST00000363944 107 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RNU6-784P-201ENST00000384330 106 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL138885.1-201ENST00000405921 675 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 HMGN2P31-201ENST00000432430 273 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RPL23AP83-201ENST00000434984 473 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 SSXP4-201ENST00000451349 245 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RPL7P49-201ENST00000471402 708 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AP002884.2-201ENST00000471647 395 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 MRPL42P6-201ENST00000486397 371 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RPL7P47-201ENST00000497299 556 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC104619.4-201ENST00000510773 249 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms