Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AL138825.1-201ENST00000618587 192 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 AC006111.3-201ENST00000622137 383 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 AL078596.1-201ENST00000624856 447 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DDX41Q9UJV9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DDX41Q9UJV9 AC007496.3-201ENST00000624987 3443 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 CDC27P3-201ENST00000635418 1910 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RNA5SP295-201ENST00000362655 121 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RNU6-942P-201ENST00000363002 107 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RNU6-99P-201ENST00000364721 107 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RNU1-100P-201ENST00000365255 165 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 SNORD116-20-201ENST00000384529 92 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 Y_RNA.533-201ENST00000384596 114 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 MIR625-201ENST00000385047 85 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RNU6-700P-201ENST00000391043 107 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RPS3AP46-201ENST00000448352 682 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RPS29P20-201ENST00000489592 171 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 AC021739.1-201ENST00000559631 174 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 MIR4680-201ENST00000580906 66 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 AC005014.2-201ENST00000607795 599 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 AC119674.1-207ENST00000641355 633 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.29□□□□□ -1.72
DDX41Q9UJV9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 Y_RNA.496-201ENST00000384444 101 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 RNU6-1156P-201ENST00000410365 100 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 RNU2-23P-201ENST00000410545 195 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AL591424.2-201ENST00000617023 128 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AC024581.2-201ENST00000619986 252 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 MTND5P16-201ENST00000460269 1703 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.28□□□□□ -1.72
DDX41Q9UJV9 AC005592.1-201ENST00000566527 1640 ntBASIC4.28□□□□□ -1.72
DDX41Q9UJV9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
DDX41Q9UJV9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 RNA5SP51-201ENST00000364750 119 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 RNU6-985P-201ENST00000410182 104 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AP000275.1-201ENST00000411943 390 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC113618.1-201ENST00000416747 285 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC007098.1-201ENST00000420122 367 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC106707.2-201ENST00000484182 374 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 RNU6-475P-201ENST00000516073 104 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AP000889.1-201ENST00000530968 660 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 CR383656.8-201ENST00000549046 145 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 MIR5696-201ENST00000578474 85 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 AC008121.3-201ENST00000618726 433 ntBASIC4.27□□□□□ -1.73
DDX41Q9UJV9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX41Q9UJV9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 U3.6-201ENST00000363622 211 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RNU6-595P-201ENST00000363944 107 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RNU6-784P-201ENST00000384330 106 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL138885.1-201ENST00000405921 675 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 HMGN2P31-201ENST00000432430 273 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RPL23AP83-201ENST00000434984 473 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 SSXP4-201ENST00000451349 245 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RPL7P49-201ENST00000471402 708 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AP002884.2-201ENST00000471647 395 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 MRPL42P6-201ENST00000486397 371 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RPL7P47-201ENST00000497299 556 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC104619.4-201ENST00000510773 249 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms