Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RNU1-82P-201ENST00000390851 165 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AL592291.1-201ENST00000403830 352 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 MIR320B2-201ENST00000408479 138 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 RNU6-651P-201ENST00000411040 105 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 ELOCP19-201ENST00000411919 318 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AC138623.1-201ENST00000418060 216 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AL591419.1-201ENST00000427423 339 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 UQCRBP2-201ENST00000447827 297 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 MRPS10P1-201ENST00000448483 130 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 NUTF2P3-201ENST00000448540 384 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 RNU6-625P-201ENST00000459412 107 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 Y_RNA.662-201ENST00000516028 97 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AP005660.1-201ENST00000522972 293 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 MIR4277-201ENST00000578298 84 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 BPIFA4P-203ENST00000603168 689 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 RNU6-91P-201ENST00000607774 107 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AC005520.5-201ENST00000613926 164 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 AC083809.1-201ENST00000615051 472 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 ZNF137P-201ENST00000456718 1920 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 AC106871.1-201ENST00000568324 3102 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 RNU1-64P-201ENST00000365443 163 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 RNU6-47P-201ENST00000383866 107 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 RNU6-793P-201ENST00000384233 104 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 Y_RNA.506-201ENST00000384494 102 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 RNU6-125P-201ENST00000384505 107 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 EI24P2-201ENST00000397776 1076 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 SDHCP2-201ENST00000398565 501 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 HSPE1P26-201ENST00000405341 275 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 AL591034.1-201ENST00000407447 340 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 RNU6-1140P-201ENST00000410517 106 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 AC090525.1-201ENST00000479116 478 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 SNORA31.16-201ENST00000516773 139 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 AC018448.1-201ENST00000552843 316 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 AP005019.3-201ENST00000620418 560 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 AC107068.1-201ENST00000563286 4218 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 ZNF204P-201ENST00000416749 2397 ntBASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXD3Q9UJU5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 MAPK10-320ENST00000641462 6696 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 AC099654.7-201ENST00000635788 2127 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 RNU1-83P-201ENST00000363426 164 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 Y_RNA.435-201ENST00000384095 112 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 RNU6-187P-201ENST00000384139 106 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 RNU6-1310P-201ENST00000384153 107 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 RNU6-748P-201ENST00000384648 107 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 AL160275.2-201ENST00000412010 394 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 AC140479.3-201ENST00000418944 1126 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 PTGES3P4-201ENST00000426243 356 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 AP001324.2-201ENST00000461163 319 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 AC107626.1-201ENST00000471084 183 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 IGKV2-38-201ENST00000517443 247 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 AC105137.2-201ENST00000569073 466 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 HMGN2P15-201ENST00000585707 270 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 HSPE1P7-201ENST00000604681 321 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 SNORD98-201ENST00000636377 67 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 AC135776.4-201ENST00000624300 1904 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms