Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 AC005668.1-201ENST00000571142 476 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 AL358072.1-201ENST00000604156 575 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 AC123912.5-201ENST00000605470 343 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 AL121890.5-201ENST00000620848 304 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 AC104985.3-201ENST00000623479 597 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 AL136313.1-201ENST00000624804 202 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 RNU6-777P-201ENST00000364265 104 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 RNU6-166P-201ENST00000384371 107 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 RNU6-843P-201ENST00000384454 104 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 MIR301A-201ENST00000385261 86 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 UBE2V1P10-201ENST00000414685 269 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 AP000542.1-201ENST00000448473 371 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 RPL23AP35-201ENST00000451906 501 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 AC093259.1-201ENST00000509755 300 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 AC136618.2-201ENST00000575091 400 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 AP000942.3-201ENST00000603702 160 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 MTND5P33-201ENST00000571250 1450 ntBASIC1.05□□□□□ -2.24
VPS29Q9UBQ0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 RNU6-1210P-201ENST00000363775 107 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 SNORD14B-201ENST00000364533 90 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 RNU6-487P-201ENST00000365430 104 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 RNU6-701P-201ENST00000384059 107 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 MIR1267-201ENST00000408723 78 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 RPS12P24-201ENST00000412619 387 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 AC004965.1-201ENST00000413033 213 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 AL135790.2-201ENST00000437701 267 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 AC087477.1-201ENST00000465747 340 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 MTCYBP40-201ENST00000509390 1135 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 AC099785.1-201ENST00000605697 437 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 MIR6715A-201ENST00000615929 79 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 AC092140.2-201ENST00000618027 521 ntBASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS29Q9UBQ0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 AL391987.6-201ENST00000305671 199 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 AL589826.1-201ENST00000340697 249 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 RNU6-414P-201ENST00000363705 104 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 MIR29B2-201ENST00000385055 81 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 Y_RNA.578-201ENST00000390903 88 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 AL359704.1-201ENST00000411586 781 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 AC016831.2-201ENST00000417179 352 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 AC083875.1-201ENST00000419509 405 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 HMGN2P18-201ENST00000450680 270 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 SNORD97-201ENST00000459187 142 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 RNU6-991P-201ENST00000516168 107 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 AP003122.4-201ENST00000530980 758 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 SUB1P4-201ENST00000566062 339 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 MTCYBP33-201ENST00000575007 1130 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 AC007363.1-201ENST00000604736 620 ntBASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS29Q9UBQ0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
VPS29Q9UBQ0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.25
VPS29Q9UBQ0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 SNORA25.8-201ENST00000364831 128 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 RNU6-160P-201ENST00000384591 107 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 CBX3P9-201ENST00000402326 552 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 RNU6-1025P-201ENST00000410629 104 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 MTCO1P17-201ENST00000411522 491 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 RPS27P16-201ENST00000425758 201 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AC092648.1-201ENST00000425870 423 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 MTCO3P5-201ENST00000433620 714 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 AL606517.1-201ENST00000446914 387 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 RNU6-953P-201ENST00000459154 107 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 RPL30P6-201ENST00000475925 342 ntBASIC1.02□□□□□ -2.25
VPS29Q9UBQ0 RPL30P1-201ENST00000488676 339 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 1032.8 ms