Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 U3.42-201ENST00000408746 214 ntBASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 SNORA57.3-201ENST00000411095 141 ntBASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 RNA5SP31-201ENST00000411144 127 ntBASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 MTCO3P19-201ENST00000415864 321 ntBASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 Y_RNA.715-201ENST00000517082 110 ntBASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 RNU6-794P-201ENST00000517261 64 ntBASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 AP004607.1-201ENST00000524456 203 ntBASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 HMGB1P14-201ENST00000557424 591 ntBASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 RNU1-30P-201ENST00000606575 163 ntBASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 AL110115.1-201ENST00000614396 364 ntBASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PPARGC1AQ9UBK2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 RNU6-450P-201ENST00000364654 107 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 MIR888-201ENST00000401186 77 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 RPL37P4-201ENST00000448908 268 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 CHEK2P4-201ENST00000450340 246 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 RN7SKP210-201ENST00000459176 261 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 RPS29P27-201ENST00000463711 170 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 AC026402.1-201ENST00000513642 170 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 AC131281.1-201ENST00000522984 164 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 AC040926.1-201ENST00000530195 238 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 LINC00933-203ENST00000559812 219 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 CYCSP39-201ENST00000565821 309 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 MIR4474-201ENST00000579189 78 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 MIR3668-201ENST00000582138 75 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 AC243829.7-201ENST00000633081 225 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 SRP72P2-201ENST00000344851 1979 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 FAM35BP-202ENST00000497389 3337 ntBASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PPARGC1AQ9UBK2 AC007656.2-201ENST00000624902 4547 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 RNU6-428P-201ENST00000362942 107 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 SNORD50.1-201ENST00000362987 71 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 RNU6-778P-201ENST00000363269 103 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 Y_RNA.551-201ENST00000384661 102 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 RNA5SP424-201ENST00000390988 115 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 Z98941.1-201ENST00000407764 100 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 HMGN2P30-201ENST00000423237 256 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 OSTCP8-201ENST00000445117 448 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 MTCO3P8-201ENST00000453691 755 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 AL136097.1-201ENST00000456945 913 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 TRBV12-2-201ENST00000489763 344 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 RPL22P13-201ENST00000493291 347 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 RNU6-1183P-201ENST00000517054 60 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 AC091144.1-201ENST00000519573 138 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 CASP1P1-201ENST00000526345 212 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 AC006600.1-201ENST00000572529 153 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 AL020997.2-201ENST00000602607 184 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 AC024153.1-201ENST00000603103 365 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 AC068831.7-201ENST00000616954 363 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 AC002076.2-201ENST00000617362 122 ntBASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
PPARGC1AQ9UBK2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 Y_RNA.188-201ENST00000363952 111 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 RNU4-50P-201ENST00000364361 141 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 RNU6-336P-201ENST00000364891 107 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 RNU6-505P-201ENST00000384427 107 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 SNORA69.1-201ENST00000390904 137 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 RPL21P17-201ENST00000397467 475 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 CYCSP19-201ENST00000411715 316 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 AP000275.1-201ENST00000411943 390 ntBASIC3.86□□□□□ -1.79
PPARGC1AQ9UBK2 AL139247.1-201ENST00000422768 325 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms