Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 Y_RNA.367-201ENST00000365544 101 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 RNU6-72P-201ENST00000384285 79 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 Y_RNA.576-201ENST00000384781 102 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 MIR578-201ENST00000384828 96 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AL031779.1-201ENST00000415663 330 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 USP9YP27-201ENST00000418455 438 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 RPL7P12-201ENST00000446719 750 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AL031659.1-201ENST00000447075 539 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AC104058.1-201ENST00000448028 297 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AC112771.1-201ENST00000463581 102 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 HMGB1P30-201ENST00000492455 606 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AC104806.1-201ENST00000508720 308 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AC091965.2-201ENST00000512324 613 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AP004607.1-201ENST00000524456 203 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 OR5AL2P-201ENST00000532185 920 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AC025678.1-201ENST00000567861 338 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AC008147.4-201ENST00000617570 1204 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 ZNF355P-201ENST00000427301 3216 ntBASIC1.87□□□□□ -2.11
CLCF1Q9UBD9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 OR56A5-201ENST00000340110 738 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 RNU6-371P-201ENST00000364283 108 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 RNA5SP125-201ENST00000364843 120 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 SNORD115-7-201ENST00000365306 82 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 MIR524-201ENST00000385242 87 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AL133475.1-201ENST00000404414 305 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 GSTA9P-201ENST00000406231 611 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 RN7SKP142-201ENST00000411236 328 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 EEF1A1P40-201ENST00000412883 573 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 RPL21P90-201ENST00000415692 466 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 CYCSP48-201ENST00000417124 323 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 BX295541.1-201ENST00000417774 250 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 PIGFP2-201ENST00000421400 651 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AC003685.2-201ENST00000422795 395 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AL445646.1-201ENST00000431784 216 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 HMGN2P3-201ENST00000433603 273 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 MTCO3P5-201ENST00000433620 714 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 HMGN2P5-201ENST00000436882 273 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AC244505.5-201ENST00000443639 207 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 MTCYBP1-201ENST00000454315 1119 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 snoU109.2-201ENST00000459316 135 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 MED28P2-201ENST00000475771 317 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 SMURF2P1-201ENST00000514992 481 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 SNORA25.11-201ENST00000515935 105 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AC006566.1-201ENST00000608943 513 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AC109347.2-201ENST00000610220 349 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AP001486.3-201ENST00000615334 372 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AC072046.2-201ENST00000618366 268 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 AL359740.1-201ENST00000624340 592 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 SCARNA4-202ENST00000625402 129 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 MIR3529-201ENST00000637713 78 ntBASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CLCF1Q9UBD9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 RNU6-1287P-201ENST00000362914 107 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 RNU6-116P-201ENST00000384042 109 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 RNU6-74P-201ENST00000384235 107 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 RNU6-1060P-201ENST00000384664 107 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 MIR504-201ENST00000385065 83 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 MIR454-201ENST00000390180 115 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 RNU2-2P-201ENST00000410396 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 OR6C66P-201ENST00000414917 930 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 TOMM20P4-201ENST00000427861 435 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AC133104.1-201ENST00000429100 218 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 WARS2P1-201ENST00000429678 537 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 MTATP6P17-201ENST00000431030 672 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 MTND1P26-201ENST00000440488 538 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 KATNBL1P3-201ENST00000443475 909 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AL360271.2-201ENST00000447710 161 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 FDX1P2-201ENST00000450769 375 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms