Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 SNORA73.2-201ENST00000364946 201 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 RN7SKP111-201ENST00000410349 271 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 MRPS18CP6-201ENST00000423587 223 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 AC008267.5-201ENST00000424928 265 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 BX679664.1-201ENST00000434429 253 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 SNRPEP9-201ENST00000436794 238 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 AL135752.1-201ENST00000479477 471 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 SNORA25.10-201ENST00000515926 124 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 SNORA70.19-201ENST00000516717 90 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 CASP1P1-201ENST00000526345 212 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 AC005014.2-201ENST00000607795 599 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 AC004832.5-201ENST00000608677 401 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 AL591516.1-201ENST00000611326 274 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 AC006133.1-201ENST00000617106 264 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 RNU6-50P-201ENST00000362356 103 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 RNU6-1309P-201ENST00000363305 108 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 Y_RNA.133-201ENST00000363428 110 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 Y_RNA.144-201ENST00000363521 113 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 RNU6-1317P-201ENST00000364582 104 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 RNU6-827P-201ENST00000365553 106 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 RNU6-140P-201ENST00000384566 108 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 Y_RNA.527-201ENST00000384573 102 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 RNU6-1105P-201ENST00000384774 107 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 PTMAP2-201ENST00000397627 327 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 Y_RNA.605-201ENST00000410577 105 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 YPEL5P1-201ENST00000419731 367 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 AL358176.2-201ENST00000425769 204 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 AP000907.1-201ENST00000428428 510 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 RPL23AP67-201ENST00000465341 474 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 RPL23AP45-201ENST00000476406 468 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 SNORD59.2-201ENST00000516873 68 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 AC010653.1-201ENST00000571108 881 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 AC005899.2-201ENST00000584353 90 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 AC099506.2-201ENST00000623074 221 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
EHD3Q9NZN3 CDC27P3-201ENST00000635418 1910 ntBASIC3.31□□□□□ -1.88
EHD3Q9NZN3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 MTND5P27-201ENST00000428871 1720 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AL359693.1-201ENST00000614959 2407 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 FTLP6-201ENST00000355274 422 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AC117470.1-201ENST00000381974 330 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 DEFB109C-201ENST00000382575 264 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 DEFB109B-201ENST00000382656 264 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 SNORA41-201ENST00000384675 132 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 RNU6-985P-201ENST00000410182 104 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 RNU6-174P-201ENST00000410406 106 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AC092047.1-201ENST00000424997 240 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AC091286.1-201ENST00000431233 461 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 snoU109.2-201ENST00000459316 135 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 RNU6-1037P-201ENST00000459571 107 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 FO393415.2-201ENST00000480085 343 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AC068781.1-201ENST00000488231 618 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 SNORA67.7-201ENST00000516664 135 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 RNU6-307P-201ENST00000516743 106 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 RNU6-264P-201ENST00000517134 104 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 SNORD116.3-201ENST00000517176 78 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AC103996.1-201ENST00000555468 102 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 MIR3158-1-201ENST00000583596 81 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AC008121.1-201ENST00000603244 268 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AC009314.1-201ENST00000603871 304 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.3□□□□□ -1.88
EHD3Q9NZN3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
EHD3Q9NZN3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms