Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AP004607.1-201ENST00000524456 203 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 CR383656.8-201ENST00000549046 145 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC015712.3-201ENST00000559380 164 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC093249.1-201ENST00000567049 203 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AL353778.1-201ENST00000603149 408 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AL138889.2-201ENST00000603883 242 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AL359999.1-201ENST00000604513 294 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 ELOCP5-201ENST00000604924 333 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC093424.1-201ENST00000604999 338 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC105129.3-201ENST00000605455 485 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AL773524.1-201ENST00000614065 229 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC006927.3-201ENST00000638789 384 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AP000553.5-201ENST00000641933 54 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 RNU5E-1-201ENST00000362477 120 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 RNU5F-6P-201ENST00000362979 116 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 RNU6-1140P-201ENST00000410517 106 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 Y_RNA.608-201ENST00000410647 95 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 HMGB3P2-201ENST00000411913 584 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 UBE2V1P10-201ENST00000414685 269 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 AL158823.1-201ENST00000418441 478 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 AL365184.2-201ENST00000431139 435 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 AL590365.1-201ENST00000450788 243 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 AC012308.1-201ENST00000451232 178 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 AP000797.1-201ENST00000478870 387 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 AC116337.1-201ENST00000509680 687 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 RNU2-53P-201ENST00000516257 147 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 RN7SKP287-201ENST00000516546 266 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 RNU2-44P-201ENST00000516795 194 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 RNU6-586P-201ENST00000517265 104 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 AC009094.1-201ENST00000564443 426 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 MTCYBP33-201ENST00000575007 1130 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 BNIP3P10-201ENST00000605360 577 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 AL031775.1-201ENST00000607014 887 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 RNU6-87P-201ENST00000607561 108 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 uc_338.15-201ENST00000615470 191 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 AC092140.2-201ENST00000618027 521 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 AL356266.1-201ENST00000623311 483 ntBASIC1.85□□□□□ -2.11
KLHL28Q9NXS3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 AL356292.1-201ENST00000283110 373 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 RNU6-500P-201ENST00000362349 107 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 SNORD14B-201ENST00000364533 90 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 RNU6-622P-201ENST00000384272 103 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 MIR518A2-201ENST00000384966 87 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 RNA5SP338-201ENST00000410495 85 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 AC119618.1-201ENST00000434191 222 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 MTCYBP39-201ENST00000437562 491 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 MTND5P2-201ENST00000442927 1142 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 snoU109.2-201ENST00000459316 135 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 snoU109.1-201ENST00000459339 135 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 AC010587.1-201ENST00000505809 469 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 AF131216.2-201ENST00000512316 564 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 ADI1P3-201ENST00000549509 470 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 ZNF321P-202ENST00000550843 495 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 OR11H5P-201ENST00000554039 926 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 MIR5697-201ENST00000578045 78 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 AC012409.4-201ENST00000612923 249 ntBASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
KLHL28Q9NXS3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
KLHL28Q9NXS3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 MIR10A-201ENST00000385043 110 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 MTCO3P5-201ENST00000433620 714 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AL512286.1-201ENST00000439244 400 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AL137159.1-201ENST00000452808 512 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AC091965.2-201ENST00000512324 613 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms