Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU6-393P-201ENST00000384475 107 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 RNA5SP219-201ENST00000390940 113 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AL138827.1-201ENST00000402666 306 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 U3.37-201ENST00000408528 213 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 SKA2P1-201ENST00000425592 390 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 MYL8P-204ENST00000431574 518 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AL583843.1-201ENST00000456070 346 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 HMGN2P26-201ENST00000463169 339 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 RPL23AP70-201ENST00000483361 460 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 RPL38P4-201ENST00000502376 214 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AC018710.1-201ENST00000506509 158 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 RNU6-358P-201ENST00000516564 75 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 RNU6-572P-201ENST00000516724 80 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 SNORA31.19-201ENST00000517079 126 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 RNU1-104P-201ENST00000517280 175 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AC078814.3-201ENST00000553036 491 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AL391261.3-201ENST00000557194 520 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 HMGB1P14-201ENST00000557424 591 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 MIR4513-201ENST00000581077 86 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AC090616.3-201ENST00000582184 217 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 NRBF2P5-201ENST00000603087 788 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AL645944.1-201ENST00000603857 493 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 AC092807.2-201ENST00000609367 243 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 RNU6-395P-201ENST00000365662 106 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 RNU6-658P-201ENST00000384606 106 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 MIR144-201ENST00000384886 86 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 USP9YP20-201ENST00000419224 558 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AL139413.1-201ENST00000421309 217 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 ERLEC1P1-201ENST00000433806 578 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AP001486.1-201ENST00000463339 476 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 RPL31P58-201ENST00000469001 379 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AL049873.1-201ENST00000480540 376 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AC083904.1-201ENST00000487828 231 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 RN7SL504P-201ENST00000494496 287 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 HMGB3P3-201ENST00000510526 400 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AC107222.1-201ENST00000510899 637 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 RNU1-86P-201ENST00000516108 154 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 Y_RNA.665-201ENST00000516177 98 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 RNA5SP282-201ENST00000516355 108 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 RNU1-107P-201ENST00000516617 154 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 CKS1BP7-201ENST00000522230 235 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 HMGN2P15-201ENST00000585707 270 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AC092747.3-201ENST00000603769 301 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 U6.99-201ENST00000637524 83 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NDE1Q9NXR1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 AL359693.1-201ENST00000614959 2407 ntBASIC2.46□□□□□ -2.02
NDE1Q9NXR1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.45□□□□□ -2.02
NDE1Q9NXR1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NDE1Q9NXR1 RNU6-522P-201ENST00000364497 107 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 SNORA67.1-201ENST00000364749 141 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 Y_RNA.373-201ENST00000365600 103 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
NDE1Q9NXR1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AL356776.1-201ENST00000406574 447 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 RNU6-1148P-201ENST00000410992 104 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AL592148.1-201ENST00000413568 445 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.45□□□□□ -2.02
NDE1Q9NXR1 MTND4LP11-201ENST00000422184 280 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AL353729.1-201ENST00000425044 720 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 CALM1P1-201ENST00000442082 433 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 PRPS1P1-201ENST00000445305 876 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AC087884.1-201ENST00000469738 328 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.45□□□□□ -2.02
NDE1Q9NXR1 PRDX4P1-201ENST00000507189 574 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AC025465.4-201ENST00000513422 638 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 RPL7P20-201ENST00000520308 745 ntBASIC2.45□□□□□ -2.02
NDE1Q9NXR1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms