Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 TOMM20P4-201ENST00000427861 435 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 MTCO3P5-201ENST00000433620 714 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 RPS24P1-201ENST00000438550 371 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 MTND2P29-201ENST00000438595 412 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC245102.2-201ENST00000448956 180 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC068587.2-201ENST00000478386 781 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC020699.1-201ENST00000505161 445 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 SNORA31.23-201ENST00000517219 133 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AP003461.1-201ENST00000528866 78 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AP003181.2-201ENST00000528941 181 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 MIR5697-201ENST00000578045 78 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AL353778.1-201ENST00000603149 408 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AL078605.1-201ENST00000603529 500 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC012360.2-201ENST00000609349 391 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 Z82243.1-201ENST00000609432 473 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC004908.3-201ENST00000610248 625 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC016597.2-201ENST00000613256 341 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC104010.1-201ENST00000616889 150 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AL359314.1-201ENST00000616913 261 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC108479.2-201ENST00000617314 601 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.6□□□□□ -2.15
CLN6Q9NWW5 AC006927.3-201ENST00000638789 384 ntBASIC1.6□□□□□ -2.15
CLN6Q9NWW5 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 RNU6-234P-201ENST00000365229 104 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CLN6Q9NWW5 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.59□□□□□ -2.15
CLN6Q9NWW5 RNU6-641P-201ENST00000384006 107 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 RNU6-611P-201ENST00000384276 104 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 SNORA8-201ENST00000384574 139 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 MIR578-201ENST00000384828 96 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 RNA5SP212-201ENST00000391223 107 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 RPS3AP36-201ENST00000398190 775 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 MTCYBP36-201ENST00000404146 440 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 RNU2-23P-201ENST00000410545 195 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.59□□□□□ -2.15
CLN6Q9NWW5 AL139415.2-201ENST00000431968 163 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.59□□□□□ -2.15
CLN6Q9NWW5 BZW1P2-201ENST00000473537 826 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 AP001025.1-201ENST00000486139 332 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 RPL38P4-201ENST00000502376 214 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.59□□□□□ -2.15
CLN6Q9NWW5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.59□□□□□ -2.15
CLN6Q9NWW5 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.59□□□□□ -2.15
CLN6Q9NWW5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.59□□□□□ -2.15
CLN6Q9NWW5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.59□□□□□ -2.15
CLN6Q9NWW5 CLIC4P2-201ENST00000601934 717 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 AC012065.4-201ENST00000602445 679 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 AC093648.1-201ENST00000623546 606 ntBASIC1.59□□□□□ -2.15
CLN6Q9NWW5 RNU4-1-201ENST00000363925 141 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 RNA5SP465-201ENST00000391195 109 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AC019129.1-201ENST00000403786 261 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 RNA5SP390-201ENST00000410191 113 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 RNU2-39P-201ENST00000410604 198 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 RNA5SP111-201ENST00000411386 101 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 PGBD4P6-201ENST00000421501 610 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AL445685.2-201ENST00000422551 342 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.58□□□□□ -2.16
CLN6Q9NWW5 USP9YP15-201ENST00000442391 422 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.58□□□□□ -2.16
CLN6Q9NWW5 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.58□□□□□ -2.16
CLN6Q9NWW5 PRELID3BP1-201ENST00000457142 540 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 SNORD11.1-201ENST00000459482 85 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AC117522.1-201ENST00000509821 380 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AC092140.2-201ENST00000618027 521 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AL590808.1-201ENST00000618696 141 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AC064859.1-201ENST00000624741 174 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 AL157786.1-207ENST00000627771 695 ntBASIC1.58□□□□□ -2.16
CLN6Q9NWW5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
CLN6Q9NWW5 FARSBP1-201ENST00000435808 1778 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CLN6Q9NWW5 Y_RNA.40-201ENST00000362645 93 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
CLN6Q9NWW5 MIR558-201ENST00000384920 94 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 CBX3P9-201ENST00000402326 552 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 SNORA3.2-201ENST00000408221 125 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 RNU2-48P-201ENST00000410694 191 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 AC074117.2-201ENST00000417130 397 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.57□□□□□ -2.16
CLN6Q9NWW5 AL589872.1-201ENST00000426602 288 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 MED13P1-201ENST00000428342 171 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.57□□□□□ -2.16
CLN6Q9NWW5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.57□□□□□ -2.16
CLN6Q9NWW5 HMGB1P31-201ENST00000437242 427 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 HSPE1P21-201ENST00000438283 308 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 AL512286.1-201ENST00000439244 400 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 MTND5P2-201ENST00000442927 1142 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms