Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PARPBPQ9NWS1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
PARPBPQ9NWS1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 MIR412-201ENST00000362142 91 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.277-201ENST00000364754 102 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 RNU6-213P-201ENST00000384051 104 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.785-201ENST00000384290 109 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 MIR10A-201ENST00000385043 110 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 MIR1193-201ENST00000408109 78 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 AP000275.1-201ENST00000411943 390 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 ARF4P2-201ENST00000430209 526 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 TBCAP1-201ENST00000436520 327 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 AC004383.1-201ENST00000438135 289 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 AC034236.1-201ENST00000469891 373 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 AK3P2-201ENST00000507976 429 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 AC026726.1-201ENST00000512859 601 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 RNU6-1256P-201ENST00000516539 103 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 RNU6-612P-201ENST00000516909 102 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 SNORA31.20-201ENST00000517111 133 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 AC004024.1-201ENST00000549244 247 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 MIR5047-201ENST00000579212 100 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 SRGNP1-201ENST00000603392 451 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 AC004852.3-201ENST00000614131 326 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 U6.92-201ENST00000636464 89 ntBASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PARPBPQ9NWS1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 UBE3AP2-201ENST00000429033 2259 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 AL391987.6-201ENST00000305671 199 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.54-201ENST00000362766 105 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.405-201ENST00000383979 100 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.451-201ENST00000384200 100 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.524-201ENST00000384564 100 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.561-201ENST00000384694 100 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 SNORD115-46-201ENST00000390982 71 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.623-201ENST00000411128 95 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 U8.21-201ENST00000459536 136 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 RPL30P10-201ENST00000488148 337 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 RNU6-182P-201ENST00000516970 105 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.713-201ENST00000517013 96 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 MIR4300-201ENST00000581016 96 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 AC008121.1-201ENST00000603244 268 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 AC006077.1-201ENST00000604746 343 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 MIR8058-201ENST00000615737 89 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 FTX_2.1-201ENST00000618816 94 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 AL354798.1-201ENST00000622505 329 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 AC091152.2-201ENST00000591628 2569 ntBASIC3.45□□□□□ -1.86
PARPBPQ9NWS1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.27-201ENST00000362540 103 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.143-201ENST00000363520 106 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 RNU6-280P-201ENST00000364145 104 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.269-201ENST00000364685 89 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 Y_RNA.555-201ENST00000384673 110 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 MIR199A2-201ENST00000385289 110 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 SNORA12.2-201ENST00000391040 156 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 RPL21P75-201ENST00000396599 483 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 MIR190B-201ENST00000401119 79 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 RPL21P28-201ENST00000401418 483 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 MIR548H3-201ENST00000408771 118 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 AL590556.1-201ENST00000423231 483 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 AC007919.1-201ENST00000429380 217 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 AC091286.1-201ENST00000431233 461 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 AC011742.1-201ENST00000431448 434 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 snoU109.2-201ENST00000459316 135 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 RNU7-87P-201ENST00000459343 62 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 RPL21P39-201ENST00000463605 483 ntBASIC3.44□□□□□ -1.86
PARPBPQ9NWS1 RN7SL330P-201ENST00000469709 307 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms