Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 RNU5F-3P-201ENST00000363767 117 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 RNA5SP505-201ENST00000364748 108 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 SNORA29-201ENST00000384183 140 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 AL356535.1-201ENST00000440335 398 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 AC006026.2-201ENST00000457376 180 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 AC092798.1-201ENST00000458542 409 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 RNA5SP310-201ENST00000459084 116 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 AC084357.1-201ENST00000473404 255 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 UBL5P4-201ENST00000562584 236 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 AC091042.1-201ENST00000579213 173 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 AL356157.2-201ENST00000605122 111 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 MIR6758-201ENST00000620653 63 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 AP001340.1-201ENST00000624405 217 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 AC126323.6-202ENST00000568092 3511 ntBASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 AC126755.2-208ENST00000327792 462 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 AC138969.1-213ENST00000331436 462 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 RNU6-72P-201ENST00000384285 79 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 AC007560.1-201ENST00000426912 237 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 RN7SL517P-201ENST00000462240 305 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 IGLV2-34-201ENST00000490007 283 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 RNU6-589P-201ENST00000516485 107 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 Y_RNA.694-201ENST00000516677 117 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 Y_RNA.712-201ENST00000517011 92 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 AC090049.2-201ENST00000550377 109 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 MIR3145-201ENST00000580727 82 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 AL354798.1-201ENST00000622505 329 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 AL034408.1-202ENST00000636088 415 ntBASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.69□□□□□ -1.66
CUEDC1Q9NWM3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 RNA5SP191-201ENST00000362585 102 ntBASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 AL358075.3-201ENST00000426289 226 ntBASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 Y_RNA.637-201ENST00000459424 114 ntBASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 AC090281.1-201ENST00000523019 276 ntBASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 AL078604.3-201ENST00000615580 211 ntBASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.68□□□□□ -1.66
CUEDC1Q9NWM3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 RNU6-527P-201ENST00000363425 104 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 RNU6-147P-201ENST00000383983 107 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 RNA5SP44-201ENST00000410446 133 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 ANP32BP2-201ENST00000454525 545 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 snoU13.1-201ENST00000459157 104 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 ENPP7P9-201ENST00000514456 627 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 RNA5SP76-201ENST00000516277 87 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 RNU6-572P-201ENST00000516724 80 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 RNU6-709P-201ENST00000517257 104 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 MIR1254-2-201ENST00000579553 63 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 MIR3667-201ENST00000581025 74 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms