Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 MIR412-201ENST00000362142 91 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 RNU6-371P-201ENST00000364283 108 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 RNU4-20P-201ENST00000365601 151 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 RNU6-45P-201ENST00000384471 107 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 SNORD70.1-201ENST00000391007 85 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 FO393413.1-201ENST00000402892 195 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AL590004.2-201ENST00000404787 371 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 RNU4-26P-201ENST00000410270 107 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 NDUFB4P5-201ENST00000415445 361 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AL669831.1-202ENST00000428504 417 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 GTF2IP13-201ENST00000438487 386 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 MRPL50P4-201ENST00000446432 475 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 HMGN2P26-201ENST00000463169 339 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 MTCO3P9-201ENST00000506989 781 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 MIR4506-201ENST00000584693 77 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AC010620.2-201ENST00000600135 313 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 RNU6-89P-201ENST00000606519 100 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 Z82243.1-201ENST00000609432 473 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AC022418.1-201ENST00000624118 445 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AC064859.1-201ENST00000624741 174 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AC110079.1-202ENST00000635213 138 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 AC093908.1-201ENST00000623125 8092 ntBASIC3.02□□□□□ -1.93
DDX4Q9NQI0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX4Q9NQI0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
DDX4Q9NQI0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
DDX4Q9NQI0 Y_RNA.100-201ENST00000363141 102 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 Y_RNA.480-201ENST00000384364 102 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 RPL21P90-201ENST00000415692 466 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 MTND4LP11-201ENST00000422184 280 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 AC098614.2-201ENST00000426040 255 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 HMGB1P9-201ENST00000429856 646 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 AL360271.2-201ENST00000447710 161 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 NDUFB1P2-201ENST00000449477 176 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 MTATP6P7-201ENST00000453315 681 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 RPL12P25-201ENST00000455592 494 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 RNU7-167P-201ENST00000459160 62 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 snoU13.28-201ENST00000459235 104 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 RNU6-1208P-201ENST00000459588 107 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.01□□□□□ -1.93
DDX4Q9NQI0 RN7SL283P-201ENST00000489055 303 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 AC112206.3-201ENST00000514578 389 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 RNU2-69P-201ENST00000516061 100 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 RNA5SP24-201ENST00000516478 95 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 RNU6-928P-201ENST00000516876 104 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.01□□□□□ -1.93
DDX4Q9NQI0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.01□□□□□ -1.93
DDX4Q9NQI0 MIR5583-1-201ENST00000580941 59 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 BNIP3P10-201ENST00000605360 577 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 U4.3-201ENST00000621047 82 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 DUXAP9-208ENST00000622815 614 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 AP003400.5-201ENST00000624827 617 ntBASIC3.01□□□□□ -1.93
DDX4Q9NQI0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.01□□□□□ -1.93
DDX4Q9NQI0 CASC19-280ENST00000642102 1351 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
DDX4Q9NQI0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
DDX4Q9NQI0 Y_RNA.88-201ENST00000363029 99 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 RNU6-198P-201ENST00000384258 104 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 MIR578-201ENST00000384828 96 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 SNORA16.2-201ENST00000390991 127 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 AL356776.1-201ENST00000406574 447 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 RPL30P16-201ENST00000419341 429 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 AC099548.1-201ENST00000421443 426 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 AL121601.2-201ENST00000438019 707 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 PRPS1P1-201ENST00000445305 876 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 MTND3P10-201ENST00000450967 341 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3□□□□□ -1.93
DDX4Q9NQI0 AC022493.1-201ENST00000492984 337 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 MTCYBP18-201ENST00000501056 747 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 CCDC34P1-201ENST00000507441 517 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 AC074344.1-201ENST00000512823 224 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 RNA5SP385-201ENST00000515947 110 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 RNU6-189P-201ENST00000516120 101 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 AC026241.1-201ENST00000517873 2142 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 AC009902.1-201ENST00000519351 183 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3□□□□□ -1.93
DDX4Q9NQI0 OR11H5P-201ENST00000554039 926 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 AL645944.1-201ENST00000603857 493 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 AC007938.3-201ENST00000604965 623 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 AC009033.1-201ENST00000624279 431 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3□□□□□ -1.93
DDX4Q9NQI0 U2.21-201ENST00000637295 81 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms