Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 AC010680.1-201ENST00000590024 3590 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 MTND4P1-201ENST00000457501 1466 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 RNU6-595P-201ENST00000363944 107 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 RNU6-99P-201ENST00000364721 107 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 Y_RNA.459-201ENST00000384251 102 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 HLFP1-201ENST00000402375 499 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AL138885.1-201ENST00000405921 675 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 RNU6-1156P-201ENST00000410365 100 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 RN7SKP210-201ENST00000459176 261 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 RNU6-475P-201ENST00000516073 104 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 ACA59.2-201ENST00000517061 156 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AC144568.1-201ENST00000520139 137 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AC034105.4-201ENST00000568304 277 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AC004584.2-201ENST00000570407 410 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AC087499.8-201ENST00000578406 226 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 MIR4474-201ENST00000579189 78 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AL158827.2-201ENST00000602494 330 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AL691447.3-201ENST00000635020 330 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 AC244205.2-202ENST00000635781 342 ntBASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
TRIM39Q9HCM9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 Y_RNA.496-201ENST00000384444 101 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 MIR554-201ENST00000384874 96 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 MTCYBP2-201ENST00000407745 171 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 RNU2-23P-201ENST00000410545 195 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 EIF1AXP1-201ENST00000419267 435 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AL139247.1-201ENST00000422768 325 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AL160004.2-201ENST00000432935 350 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AL133162.1-201ENST00000463228 453 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC107626.1-201ENST00000471084 183 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC097462.2-201ENST00000504623 481 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 Y_RNA.720-201ENST00000517166 92 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 MIR5187-201ENST00000583479 76 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC024220.1-201ENST00000603675 484 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC136443.5-201ENST00000603741 370 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AL137849.1-201ENST00000604767 169 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 SNORA62.6-201ENST00000606322 83 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC034229.5-201ENST00000624258 185 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC032011.1-201ENST00000611703 1549 ntBASIC3.74□□□□□ -1.81
TRIM39Q9HCM9 AC005592.1-201ENST00000566527 1640 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 SNORD50.1-201ENST00000362987 71 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 RNA5SP44-201ENST00000410446 133 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 PTGES3P4-201ENST00000426243 356 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 AC243964.1-201ENST00000441814 261 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 AL500522.2-201ENST00000448562 343 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 MTND5P22-201ENST00000458380 195 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 AC034236.1-201ENST00000469891 373 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 RPS26P21-201ENST00000475397 348 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 RPL30P10-201ENST00000488148 337 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 AC105758.1-201ENST00000506038 399 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 RAC1P2-201ENST00000511164 579 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 Y_RNA.721-201ENST00000517207 102 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 AC023632.4-201ENST00000517783 191 ntBASIC3.73□□□□□ -1.81
TRIM39Q9HCM9 AL590705.4-201ENST00000532209 134 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms