Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 OR6C66P-201ENST00000414917 930 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 MRPS36P1-201ENST00000421291 307 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 C1DP1-201ENST00000426049 402 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 MTND5P14-201ENST00000441481 1267 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 RNA5SP57-201ENST00000459463 123 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 FABP5P5-201ENST00000515537 406 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AC233702.2-202ENST00000562547 291 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AC060771.1-201ENST00000582031 164 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AL355802.3-201ENST00000607571 545 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AC034229.4-201ENST00000607861 441 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 AL359314.1-201ENST00000616913 261 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.85□□□□□ -2.27
KIAA1549Q9HCM3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 SNORD114-19-201ENST00000363072 75 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-560P-201ENST00000364007 108 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 CST2P1-201ENST00000425770 87 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 AL591704.1-201ENST00000432574 275 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 ZNF886P-201ENST00000450781 723 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 PRELID3BP1-201ENST00000457142 540 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 RPL9P9-202ENST00000466501 579 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 RNA5SP384-201ENST00000516615 116 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-143P-201ENST00000516942 93 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 RN7SKP256-201ENST00000517201 314 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 AC107952.2-201ENST00000606048 486 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 AC096772.1-201ENST00000609146 564 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 AC018630.2-201ENST00000534866 2403 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 AC092125.1-201ENST00000562568 1995 ntBASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
KIAA1549Q9HCM3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-1210P-201ENST00000363775 107 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 SNORD14B-201ENST00000364533 90 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 MIR518D-201ENST00000385014 87 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 MIR1262-201ENST00000408276 93 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU2-7P-201ENST00000410794 178 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 AC010409.1-201ENST00000487382 476 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-583P-201ENST00000516012 92 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-1183P-201ENST00000517054 60 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 MIR5000-201ENST00000577717 103 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 AP003485.1-201ENST00000625093 753 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-1-201ENST00000383898 107 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-42P-201ENST00000384165 107 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-36P-201ENST00000384172 107 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-4P-201ENST00000384205 107 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-5P-201ENST00000384238 107 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-3P-201ENST00000384314 107 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-2-201ENST00000384627 107 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-9-201ENST00000384776 107 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-33P-201ENST00000384793 107 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 AL161651.1-201ENST00000440882 223 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 AC079140.2-201ENST00000506193 142 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-965P-201ENST00000516721 96 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 LRRC6P1-201ENST00000532188 885 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 AL136520.1-202ENST00000555494 763 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 VN1R83P-201ENST00000595685 445 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 AC012065.4-201ENST00000602445 679 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 BNIP3P9-201ENST00000603714 553 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-6P-201ENST00000606623 107 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 AL121890.5-201ENST00000620848 304 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 AP003476.1-201ENST00000623984 516 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 U6.99-201ENST00000637524 83 ntBASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.83□□□□□ -2.28
KIAA1549Q9HCM3 RBBP8P1-201ENST00000449447 1844 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 Y_RNA.311-201ENST00000365068 96 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 SNORA25B-201ENST00000365507 128 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-546P-201ENST00000383991 107 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 AL139397.2-201ENST00000404529 772 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 AC010153.1-201ENST00000432862 727 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 FABP5P15-201ENST00000453566 214 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 RNY4P37-201ENST00000516225 96 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms