Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 MIR4764-201ENST00000580680 88 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 BNIP3P16-201ENST00000589779 534 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AC079791.1-201ENST00000605356 973 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AL391597.1-201ENST00000618707 694 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 MTND5P32-201ENST00000560711 1802 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 RNA5SP240-201ENST00000365355 128 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 RNU6-611P-201ENST00000384276 104 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 RPL37P10-201ENST00000412884 288 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 MTCO1P44-201ENST00000441935 243 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 SNORD19.2-201ENST00000516978 73 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AC024405.2-202ENST00000532731 184 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AC023158.1-201ENST00000561632 1025 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 MIR4422-201ENST00000581938 83 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AL137246.1-201ENST00000607072 977 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 MIR8074-201ENST00000615081 81 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 HSBP1P2-201ENST00000299671 229 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 RNY4P27-201ENST00000363341 96 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 RNU6-1097P-201ENST00000363586 107 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 RNU2-43P-201ENST00000410306 190 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 USP9YP21-201ENST00000420603 432 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 HMGN2P22-201ENST00000427588 175 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 MTND5P8-201ENST00000449817 1083 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AP003049.1-201ENST00000529418 457 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 NIFKP6-201ENST00000598115 845 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AC091925.2-201ENST00000625059 256 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 RNU6-302P-201ENST00000365249 107 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 DSTNP4-201ENST00000399472 474 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 FAM204CP-201ENST00000424489 642 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AC013267.1-201ENST00000458227 267 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 uc_338.15-201ENST00000615470 191 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AC011155.2-201ENST00000623202 216 ntBASIC0.23□□□□□ -2.37
CHD8Q9HCK8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.23□□□□□ -2.37
CHD8Q9HCK8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CHD8Q9HCK8 RNU1-36P-201ENST00000365130 165 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 RNU6-339P-201ENST00000384310 107 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 MIR30A-201ENST00000385092 71 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AL117342.1-201ENST00000404861 406 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 BPY2DP-201ENST00000422208 265 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.22□□□□□ -2.37
CHD8Q9HCK8 RPEP5-201ENST00000441137 268 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.22□□□□□ -2.37
CHD8Q9HCK8 BUD31P2-201ENST00000449374 300 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AL157398.1-201ENST00000452981 186 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 VPS26AP1-201ENST00000483197 979 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AC048346.1-201ENST00000510247 144 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 MIR4713-201ENST00000582691 75 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AC004775.1-201ENST00000607389 753 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AP003072.5-201ENST00000623872 773 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AL512506.2-201ENST00000624472 458 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.22□□□□□ -2.37
CHD8Q9HCK8 MIR371B-201ENST00000638082 66 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 Z75746.1-201ENST00000440243 2080 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 MIR1267-201ENST00000408723 78 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AC092573.2-201ENST00000434546 243 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 PGBD4P5-201ENST00000445958 426 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 RPS20P24-201ENST00000457473 361 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.22□□□□□ -2.37
CHD8Q9HCK8 CYCSP27-201ENST00000527643 293 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AC005832.3-201ENST00000537929 631 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 MIR3937-201ENST00000580135 106 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AC012669.1-201ENST00000603209 283 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 AC091965.5-201ENST00000624785 342 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 MIR4320-201ENST00000636981 65 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 MTND5P31-201ENST00000419366 1374 ntBASIC0.22□□□□□ -2.37
CHD8Q9HCK8 RNU6-119P-201ENST00000364882 107 ntBASIC0.21□□□□□ -2.38
CHD8Q9HCK8 SNORA25-201ENST00000384384 134 ntBASIC0.21□□□□□ -2.38
CHD8Q9HCK8 RPL22P22-201ENST00000395439 379 ntBASIC0.21□□□□□ -2.38
CHD8Q9HCK8 RNA5SP451-201ENST00000410588 110 ntBASIC0.21□□□□□ -2.38
CHD8Q9HCK8 USP9YP26-201ENST00000421008 661 ntBASIC0.21□□□□□ -2.38
CHD8Q9HCK8 USP9YP18-201ENST00000425912 695 ntBASIC0.21□□□□□ -2.38
CHD8Q9HCK8 USP9YP24-201ENST00000434374 697 ntBASIC0.21□□□□□ -2.38
CHD8Q9HCK8 RPL26P6-201ENST00000440913 438 ntBASIC0.21□□□□□ -2.38
CHD8Q9HCK8 USP9YP17-201ENST00000444617 696 ntBASIC0.21□□□□□ -2.38
CHD8Q9HCK8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.21□□□□□ -2.38
CHD8Q9HCK8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.21□□□□□ -2.38
CHD8Q9HCK8 AC015688.2-201ENST00000584523 262 ntBASIC0.21□□□□□ -2.38
CHD8Q9HCK8 BBIP1P1-201ENST00000602999 279 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms