Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 AC012468.1-201ENST00000604888 430 ntBASIC2.94□□□□□ -1.94
CLK4Q9HAZ1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLK4Q9HAZ1 AL442067.2-201ENST00000614033 363 ntBASIC2.94□□□□□ -1.94
CLK4Q9HAZ1 AL138726.1-201ENST00000614873 333 ntBASIC2.94□□□□□ -1.94
CLK4Q9HAZ1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.94□□□□□ -1.94
CLK4Q9HAZ1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.94□□□□□ -1.94
CLK4Q9HAZ1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 Y_RNA.135-201ENST00000363439 95 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 RNU6-384P-201ENST00000364900 104 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 SNORD116-11-201ENST00000383882 92 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 MIR181B1-201ENST00000385240 110 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 MIR888-201ENST00000401186 77 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 RPL26P27-201ENST00000414397 437 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AL139396.1-201ENST00000421137 167 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 HMGN2P30-201ENST00000423237 256 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 HMGB1P9-201ENST00000429856 646 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AL359672.1-201ENST00000442302 409 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 RPL32P28-201ENST00000443577 397 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 UBE2V1P7-201ENST00000446395 340 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 RPL30P14-201ENST00000482744 348 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AC008526.1-201ENST00000509149 338 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 RNU6-277P-201ENST00000516272 106 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 RNU6-1332P-201ENST00000516666 104 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 RNU6-928P-201ENST00000516876 104 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 RNU6-703P-201ENST00000516946 107 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 RNA5SP454-201ENST00000517231 127 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AC107016.2-201ENST00000547968 190 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AC138761.3-201ENST00000579993 334 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 MIR3609-201ENST00000582661 80 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 MIR4795-201ENST00000584182 89 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AP000787.2-201ENST00000604432 568 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 NUTF2P8-201ENST00000604593 363 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 APOOP1-201ENST00000604695 592 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 U2.21-201ENST00000637295 81 ntBASIC2.93□□□□□ -1.94
CLK4Q9HAZ1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 RNU6-1027P-201ENST00000383998 107 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 RNU6-214P-201ENST00000384130 107 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 Y_RNA.474-201ENST00000384341 102 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 RNA5SP274-201ENST00000410484 108 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 MTND4P28-201ENST00000426217 387 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 TOMM20P4-201ENST00000427861 435 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 SNAP23P1-201ENST00000433229 246 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 RPL37P4-201ENST00000448908 268 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 AC107399.1-201ENST00000451226 265 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 MTATP6P7-201ENST00000453315 681 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 RPL39P5-202ENST00000512505 151 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 RN7SKP57-201ENST00000517248 293 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 COPS8P3-201ENST00000526024 482 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 AP005639.2-201ENST00000527592 928 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 AC025423.5-201ENST00000550230 219 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 H3F3AP1-201ENST00000559984 334 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 AL355375.2-201ENST00000574825 175 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 MIR4790-201ENST00000577799 79 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 MIR4782-201ENST00000577987 79 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 UBL5P2-201ENST00000583788 219 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 AC023043.3-201ENST00000593113 385 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 HSPE1P7-201ENST00000604681 321 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 U6.99-201ENST00000637524 83 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 AC233263.6-201ENST00000631132 1963 ntBASIC2.92□□□□□ -1.94
CLK4Q9HAZ1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 RNU6-562P-201ENST00000362731 107 ntBASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 RNU6-778P-201ENST00000363269 103 ntBASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 RNU1-73P-201ENST00000383971 164 ntBASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 RNU6-851P-201ENST00000384565 107 ntBASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 Y_RNA.535-201ENST00000384612 99 ntBASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 MIR10A-201ENST00000385043 110 ntBASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 MIR34A-201ENST00000385130 110 ntBASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 AL360182.1-201ENST00000397433 468 ntBASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 MIR548K-201ENST00000408406 116 ntBASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 MIR1289-1-201ENST00000408836 144 ntBASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.91□□□□□ -1.94
CLK4Q9HAZ1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms