Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
BRF2Q9HAW0 RNU6-942P-201ENST00000363002 107 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 RNU6-527P-201ENST00000363425 104 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 Y_RNA.157-201ENST00000363638 102 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 SNORD116-20-201ENST00000384529 92 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 MIR670-201ENST00000390142 98 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 RNU2-25P-201ENST00000411041 191 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.85□□□□□ -1.95
BRF2Q9HAW0 SRIP2-201ENST00000428470 166 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 AC092427.1-202ENST00000430569 476 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.85□□□□□ -1.95
BRF2Q9HAW0 AC004383.1-201ENST00000438135 289 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 AL031274.1-201ENST00000450334 232 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 HMGN2P26-201ENST00000463169 339 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 AP004217.1-201ENST00000480579 346 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 RPL23AP70-201ENST00000483361 460 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 RPL23AP49-201ENST00000492925 468 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 RN7SL504P-201ENST00000494496 287 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 AC109479.2-201ENST00000517842 174 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
BRF2Q9HAW0 AC023050.3-201ENST00000541142 333 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 AC107016.2-201ENST00000547968 190 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.85□□□□□ -1.95
BRF2Q9HAW0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.85□□□□□ -1.95
BRF2Q9HAW0 APOOP1-201ENST00000604695 592 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 YPEL5P2-201ENST00000605553 359 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 ATP5A1P2-202ENST00000616464 443 ntBASIC2.85□□□□□ -1.95
BRF2Q9HAW0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.85□□□□□ -1.95
BRF2Q9HAW0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
BRF2Q9HAW0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
BRF2Q9HAW0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
BRF2Q9HAW0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.85□□□□□ -1.95
BRF2Q9HAW0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 SNORA38.1-201ENST00000364172 131 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 SNORA71.1-201ENST00000364523 117 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 RNU6-843P-201ENST00000384454 104 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 RNU6-1106P-201ENST00000390845 107 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AL133475.1-201ENST00000404414 305 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 USP9YP28-201ENST00000435142 589 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 RPL21P2-201ENST00000440049 481 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 RNU7-138P-201ENST00000459479 64 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 RPL31P58-201ENST00000469001 379 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AC087884.1-201ENST00000469738 328 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 MTCYBP18-201ENST00000501056 747 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AC098799.2-201ENST00000509466 868 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AF213884.2-201ENST00000510417 903 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AC108043.1-201ENST00000512696 574 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 RNU6-377P-201ENST00000515965 102 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 SNORA43.2-201ENST00000516652 128 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 RN7SKP40-201ENST00000517211 242 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AC087854.1-201ENST00000519706 414 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AC010186.2-204ENST00000537668 439 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.84□□□□□ -1.95
BRF2Q9HAW0 AC244517.12-201ENST00000623581 663 ntBASIC2.84□□□□□ -1.95
BRF2Q9HAW0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.84□□□□□ -1.96
BRF2Q9HAW0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.84□□□□□ -1.96
BRF2Q9HAW0 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.84□□□□□ -1.96
BRF2Q9HAW0 RNU6-78P-201ENST00000362897 107 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 Y_RNA.100-201ENST00000363141 102 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 RNU6-522P-201ENST00000364497 107 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.83□□□□□ -1.96
BRF2Q9HAW0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
BRF2Q9HAW0 SNORA26.7-201ENST00000391288 122 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 SNORA48.7-201ENST00000391302 135 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.83□□□□□ -1.96
BRF2Q9HAW0 AL096701.2-201ENST00000416920 238 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
BRF2Q9HAW0 MTND1P2-201ENST00000430604 821 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 Z98742.2-201ENST00000431564 187 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 AL591043.1-201ENST00000432461 424 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
BRF2Q9HAW0 RPL23AP45-201ENST00000476406 468 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 RPL36AP48-201ENST00000485521 314 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 AC008885.1-201ENST00000514930 301 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 Y_RNA.665-201ENST00000516177 98 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 SCARNA3-201ENST00000517097 143 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.83□□□□□ -1.96
BRF2Q9HAW0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.83□□□□□ -1.96
BRF2Q9HAW0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.83□□□□□ -1.96
BRF2Q9HAW0 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 RBM11P1-201ENST00000604951 799 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 AC123912.5-201ENST00000605470 343 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
BRF2Q9HAW0 RMST_7.1-201ENST00000621935 268 ntBASIC2.83□□□□□ -1.96
BRF2Q9HAW0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
BRF2Q9HAW0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.82□□□□□ -1.96
BRF2Q9HAW0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms