Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 OR4G2P-201ENST00000328113 903 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 RNU6-212P-201ENST00000362642 104 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 RNU6-1210P-201ENST00000363775 107 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 RNU6-611P-201ENST00000384276 104 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 SNORA8-201ENST00000384574 139 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 MIR29C-201ENST00000385231 88 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 RNU2-23P-201ENST00000410545 195 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 AL365184.2-201ENST00000431139 435 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 MTCYBP39-201ENST00000437562 491 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 AC245102.2-201ENST00000448956 180 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 AC006026.2-201ENST00000457376 180 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 SNORA59A-201ENST00000459326 152 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 MTCO2P29-201ENST00000465212 189 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 Y_RNA.687-201ENST00000516558 91 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 MTND2P7-201ENST00000521337 640 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 ELOCP32-201ENST00000548625 324 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 AC090897.2-201ENST00000581715 130 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 AL031775.1-201ENST00000607014 887 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 Z82243.1-201ENST00000609432 473 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 AC104010.1-201ENST00000616889 150 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 AC108479.2-201ENST00000617314 601 ntBASIC1.89□□□□□ -2.11
LRRC40Q9H9A6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 RNU5F-6P-201ENST00000362979 116 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 RNU6-39P-201ENST00000384344 107 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 CBX3P9-201ENST00000402326 552 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 RNA5SP390-201ENST00000410191 113 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 Y_RNA.608-201ENST00000410647 95 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 AC074117.2-201ENST00000417130 397 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 PGBD4P6-201ENST00000421501 610 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 AC007283.2-201ENST00000424739 197 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 HMGN2P3-201ENST00000433603 273 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 HMGN2P5-201ENST00000436882 273 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 MTND2P29-201ENST00000438595 412 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 AC068587.2-201ENST00000478386 781 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 HMGB3P17-201ENST00000504195 649 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 AL078605.1-201ENST00000603529 500 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 AC093648.1-201ENST00000623546 606 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 OR4G3P-201ENST00000633500 913 ntBASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
LRRC40Q9H9A6 FARSBP1-201ENST00000435808 1778 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 Y_RNA.40-201ENST00000362645 93 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 RNU4-1-201ENST00000363925 141 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 MIR578-201ENST00000384828 96 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 RNA5SP212-201ENST00000391223 107 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 RPS3AP36-201ENST00000398190 775 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 MTCYBP36-201ENST00000404146 440 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 MIR1262-201ENST00000408276 93 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 MIR1283-2-201ENST00000408621 87 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AL451074.3-201ENST00000437709 472 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AL354685.2-201ENST00000448218 1447 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 PRELID3BP1-201ENST00000457142 540 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 RPS29P21-201ENST00000496272 170 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AC107393.1-201ENST00000512403 346 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 SNORA43.2-201ENST00000516652 128 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 SCARNA1-201ENST00000517138 166 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AP003461.1-201ENST00000528866 78 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AC022616.8-201ENST00000533569 253 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AC007375.1-201ENST00000554513 578 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 MIR5697-201ENST00000578045 78 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AL353778.1-201ENST00000603149 408 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AC087241.4-201ENST00000612441 480 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AL132822.1-201ENST00000617063 513 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AC007671.2-201ENST00000637344 619 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 AC006927.3-201ENST00000638789 384 ntBASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
LRRC40Q9H9A6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 SNORA70B-201ENST00000384210 135 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 RNU11-3P-201ENST00000391111 133 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 RNA5SP465-201ENST00000391195 109 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 RNU2-39P-201ENST00000410604 198 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 RNA5SP111-201ENST00000411386 101 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 ELOCP4-201ENST00000420090 333 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 BX510359.4-201ENST00000423750 193 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 MTND5P2-201ENST00000442927 1142 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 TRBV12-1-201ENST00000479785 344 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 AC117522.1-201ENST00000509821 380 ntBASIC1.86□□□□□ -2.11
LRRC40Q9H9A6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms